DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4630 and CG12783

DIOPT Version :9

Sequence 1:NP_001260948.1 Gene:CG4630 / 36458 FlyBaseID:FBgn0033809 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001262644.2 Gene:CG12783 / 42019 FlyBaseID:FBgn0038448 Length:493 Species:Drosophila melanogaster


Alignment Length:486 Identity:94/486 - (19%)
Similarity:165/486 - (33%) Gaps:131/486 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 KLAFVGTIHFAGLVVGTALSGYLADRYGRKHIFLFCIVFMALTGVAQALSWDYISFLFFALLNAV 225
            :||.:....|.|::..:...||:.|:.||:...|..|....|..:|...:   ::|         
  Fly    55 QLASLTAAGFMGIICSSYFWGYITDKKGRRWTLLRTITISNLCSLASMFT---VTF--------- 107

  Fly   226 GTSGVYPLAFIIGVEMVGP------------RKREMSSIVLNYFYAVGEALL------------G 266
              :|.:.:.||..:.:.||            ..|.|...:.:.:...|.|::            |
  Fly   108 --TGFFVMRFITCIFVAGPSFVAATYLSEFCSHRIMVRSITHLYMFTGFAMISCPAWATLFLSSG 170

  Fly   267 L---------SVFLPDWRQLQLALSVPPLICVAYFWLVPESVRWLLARNRREQAGVIIRRAAKVN 322
            |         |:.|..||.|.....:|.::......|:|||.::||.....::....:...::.|
  Fly   171 LIEFEEKLVGSLTLRPWRVLGCLYILPGVVAFLLLLLLPESPKFLLMIGETKRGLDTMEWISRKN 235

  Fly   323 R-RDISVELMASFKQQELDAETGQEDDVEGGLHVKKDDKIWLAVKEVARSHILMGRYAILLLIWA 386
            . |.:|.:.|......:...:..:..:.:.......||.:.|..|...      |.:..:.::..
  Fly   236 TGRTLSEDQMKRLLAYQEHVQVKRRKEHQNFFRSMLDDAMPLVRKPYG------GYFTCVCMVMF 294

  Fly   387 VNAIVYYGLSLNATSL-------SGNKYLNFALVCLVEIPGYSLAWLFLRRFGRRVALSGSL-LL 443
            |..::.:||.:..|::       .||  .|....|.|         ||:...|..:.....| ::
  Fly   295 VLGLLTHGLGIWYTAMRNRCNMRQGN--TNGMTFCQV---------LFVPETGPFIETESDLDVV 348

  Fly   444 CSIT------CVASGFVTLAQGDWIPCQTGVESRHSWS---CANWLVVTLFLVGKLGITSSFAVI 499
            ||.:      ....|||.:           |....||:   |.:..|:.:|   .|..:|:|..:
  Fly   349 CSDSFKGFNDSFVLGFVYV-----------VLYNISWASLFCVHKKVMFVF---SLVASSTFGFL 399

  Fly   500 YTFTAEMM----------------------------PTVIRSGGVGVMSTFAR----FGAMLAPF 532
            ..|....|                            ||.:|...:.:...:.|    |||||   
  Fly   400 LIFATNHMLQLFSLVFLIAFPGIIIGLLGGSLLVFVPTYLRGKALCISLMWCRCGAAFGAML--- 461

  Fly   533 VPLLASYYDPLPLLLFGTLSLVAGLLSLLLP 563
            |.....|...|.||....|.|:|..:...||
  Fly   462 VGSKIQYNCELFLLAISILPLIAACMEGYLP 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4630NP_001260948.1 2A0119 23..573 CDD:273328 94/486 (19%)
MFS 158..533 CDD:119392 84/454 (19%)
CG12783NP_001262644.2 synapt_SV2 <2..>310 CDD:130366 50/274 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45458218
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.