DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4630 and slc22a4

DIOPT Version :9

Sequence 1:NP_001260948.1 Gene:CG4630 / 36458 FlyBaseID:FBgn0033809 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_957143.1 Gene:slc22a4 / 393822 ZFINID:ZDB-GENE-040426-1517 Length:553 Species:Danio rerio


Alignment Length:592 Identity:178/592 - (30%)
Similarity:286/592 - (48%) Gaps:100/592 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DFDDILVEIGEFGRFQRRNYLLICLPVLFAAANSLSYVFTAGSPTYRCYVPECDKLVDAEYGANW 78
            |:|||...:|.:|.||...:|.:.:.:|......|..||...:|.:.|.:||     .....:.|
Zfish     3 DYDDITSFLGTWGPFQLTVFLALAISILPNGFVGLYIVFVGDTPAHECLIPE-----QINISSVW 62

  Fly    79 VSIAVPGSWSKRGHFTPSTCERFVANGDHLESSSDPWSAWPLDQCFAENFT---------TETER 134
            ...|:| :..:.|....|:|.|:     .|::         |.|....|:|         .|||.
Zfish    63 RDAAIP-TQMQDGVLKRSSCSRY-----RLDT---------LRQLSMLNYTPNVEVNLSQIETEP 112

  Fly   135 C------NQFVYGSSERTIVQQWGLQCPENLWKLAFVGTIHFAGLVVGTALSGYLADRYGRKHIF 193
            |      :|..|.|   |||.:|.|.| |..:|.....:|:|.|::|||.|||.::|||||:.:.
Zfish   113 CVDGWSYSQEFYQS---TIVTEWDLVC-EREYKGPLTSSIYFCGVLVGTFLSGQMSDRYGRRPVL 173

  Fly   194 LFCIVFMALTGVAQAL--SWDYISFLFFALLNAVGTSGV--YPLAFIIGVEMVGPRKREM-SSIV 253
            ...:....:|.:.|..  ||:..|.::|    .||.||.  |.:|:::|.|::.|..|.: .|:.
Zfish   174 FTMMALQTITILIQMFSPSWEVFSAIYF----FVGFSGFSNYVVAYVLGSEILSPASRVLFGSLG 234

  Fly   254 LNYFYAVGEALLGLSV-FLPDWRQLQLALSVPPLICVAYFWLVPESVRWLLARNRREQAGVIIRR 317
            :.....:|:....|:. |:..||.|.|..::..|:....:|.:|||.||||::.|..:|..::||
Zfish   235 VFMGSGIGQMFFPLAAYFIRSWRWLVLTNALTGLLYFPLWWFIPESPRWLLSQGRTAEAEAVLRR 299

  Fly   318 AAKVNRRDISVELMASFKQQELDAETGQEDDVEGGLHVKKDDKIWLAVKEVARSHIL-------- 374
            ||:.||......:.:|.:.:|                        .|.|.:.:..||        
Zfish   300 AAEKNRVTAPEVIFSSSEIEE------------------------AAKKRIQKHSILDILSNCNA 340

  Fly   375 MGRYAILLLIWAVNAIVYYGLSLNATSLSGNKYLNFALVCLVEIPGYSLAWLFLRRFGRRVALSG 439
            :....|..|:|.|..:.||.|.||.|:|.||.||||.|..:||:|.|.:|.|.||...||:..:.
Zfish   341 VSTILICSLLWMVITMSYYALILNTTNLHGNPYLNFFLSAVVEVPAYIIAALLLRFCSRRICQAS 405

  Fly   440 SLLLCSITCVASGFVTLAQGDWIPCQTGVESRHSWSCANWLVVTLFLVGKLGITSSFAVIYTFTA 504
            :|||      ....:.:.|  .||.:           ...|...|.::|||.:|::|.|:|..|:
Zfish   406 TLLL------GGALIFIIQ--LIPTE-----------LQGLATALEMLGKLCVTAAFCVVYAVTS 451

  Fly   505 EMMPTVIRSGGVGVMSTFARFGAMLAPFVPLLASYYDPLPLLLFGTLSLVAGLLSLLLPETFNRK 569
            |:.|||:|:..:|..|..||.|::::||:..|.:||..:|.::.|.|:|.:|::||||||:..:.
Zfish   452 ELFPTVVRNMAMGSCSMTARIGSIISPFIIYLGNYYRYIPYIVIGGLALFSGVMSLLLPESKGKV 516

  Fly   570 LPDTVEE 576
            ||:|:.:
Zfish   517 LPETIAQ 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4630NP_001260948.1 2A0119 23..573 CDD:273328 173/578 (30%)
MFS 158..533 CDD:119392 117/388 (30%)
slc22a4NP_957143.1 2A0119 12..520 CDD:273328 173/578 (30%)
MFS 144..510 CDD:119392 128/412 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.980

Return to query results.
Submit another query.