DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4630 and F23F12.13

DIOPT Version :9

Sequence 1:NP_001260948.1 Gene:CG4630 / 36458 FlyBaseID:FBgn0033809 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001033356.1 Gene:F23F12.13 / 3896740 WormBaseID:WBGene00044455 Length:528 Species:Caenorhabditis elegans


Alignment Length:574 Identity:142/574 - (24%)
Similarity:228/574 - (39%) Gaps:150/574 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LLICLPVLFAAANSLSYVFTAG----SPTYRCYVPECDKLVDAEYGANWVSIAVPGSWSKRGHFT 94
            |..|...:|    |:.|.|:.|    .|:::...|:| ||..:|                     
 Worm    21 LFFCCQQIF----SIFYNFSPGLSCDDPSFQFSKPKC-KLSKSE--------------------- 59

  Fly    95 PSTCERFVANGDHLESSSDPWSAWPLDQCFAENFTTETERCNQFVYGSSE-RTIVQQWGLQCPEN 158
              .|....||                              |::.|...:. .::||.:.:.|...
 Worm    60 --ICSELTAN------------------------------CSKIVIEEAPFHSMVQDFKMFCGTK 92

  Fly   159 LWKLAFVGTIHFAGLVVGTALSGYLADRYGRKHIFLFCIVFMALTGVAQ--ALSWDYISFLFFAL 221
            .:..|:|.||.|.|:::|....|:|.|.:|||.:..|.|....|.|||.  |.||:    :|.|.
 Worm    93 AYDAAWVATIQFIGVLIGAITYGHLGDHFGRKPVSFFGISVGILFGVASGFAPSWE----VFAAF 153

  Fly   222 LNAVGTSGVYPL----AFIIGVEMVGPRKREMSSIVLNYFYAVGEALLGLSVFLPD-WRQLQLAL 281
            ...||||....|    |:|:  |.:.|.:|.......|:.||  ..:..|:.|:.. ||...:|.
 Worm   154 RFIVGTSIASILIVFYAYIL--EFIEPEQRVFLRSFFNWGYA--RLVFTLACFICGYWRSAAIAT 214

  Fly   282 SVPPLICVAYFWLVPESVRWLLARNRREQAGVIIRRAA------KVNRRDISVELMASFKQQELD 340
            |:..|..:....::|||.:|...:.|...|....:|.|      .||..|.|:|:  |.|.:|  
 Worm   215 SLLSLPILPVLLILPESPKWFNTKKRFRDARAAEKRVAWLSGIPYVNDEDQSIEI--SEKLEE-- 275

  Fly   341 AETGQEDDVEGGLHVKKDDKIWLAVKEVARSHILMGRYAILLLIWAVNAIVYYGLSLNATSLSGN 405
                            |..||: .:|::..|..:..|..::..:|...::..:|..||:.:|:||
 Worm   276 ----------------KSTKIY-TMKDLFTSWTIAYRTIVVGSLWFSTSLSAFGSDLNSGNLAGN 323

  Fly   406 KYLN---------FALVCLVEIPGYSLAWLFLRRFGRR-------VALSGSLLLCSITCVASGFV 454
            .||:         ||.:.:..:..|      :..|.||       :|    ::||  .||....:
 Worm   324 FYLSQFVSGAVTAFAKIFVFLLDTY------VPSFDRRRLHQYPQIA----MILC--YCVIMVLM 376

  Fly   455 TLAQGDWIPCQTGVESRHSWSCANWLVVTLFLVGKLGITSSFAVIYTFTAEMMPTVIRSGGVGVM 519
            .|.:.|   |       .|....:..::.:.::|...|..::...|....|..||.||:.|:|..
 Worm   377 ILPESD---C-------GSQGSRDLAIIIINIIGVSFIEITWDACYLVAVECFPTKIRTIGIGTC 431

  Fly   520 STFARFGAMLAPFVPLLASYYDPLPLLLFGTLSLVAGLLSLLLPETFNRKLPDT 573
            |..||.||:|||.:..|:..|.|.|..:..::    |.:|||:...|   ||||
 Worm   432 SLLARTGALLAPQMAYLSDIYRPAPYAVVCSI----GTISLLISCVF---LPDT 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4630NP_001260948.1 2A0119 23..573 CDD:273328 140/572 (24%)
MFS 158..533 CDD:119392 108/403 (27%)
F23F12.13NP_001033356.1 MFS 74..476 CDD:391944 120/459 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163097
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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