DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4630 and LOC303140

DIOPT Version :9

Sequence 1:NP_001260948.1 Gene:CG4630 / 36458 FlyBaseID:FBgn0033809 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_008765965.1 Gene:LOC303140 / 303140 RGDID:1561735 Length:555 Species:Rattus norvegicus


Alignment Length:572 Identity:182/572 - (31%)
Similarity:306/572 - (53%) Gaps:57/572 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DFDDILVEIGEFGRFQRRNYLLICLPVLFAAANSLSYVFTAGSPTYRCYVPECDKLVDAEYGANW 78
            |:|::...:||:|.|||..:.|:...::......||.||...||.:||.||:...|..|     |
  Rat     3 DYDELTAFLGEWGPFQRLIFFLLSASIIPNGFTGLSAVFLTASPEHRCLVPDTVNLSSA-----W 62

  Fly    79 VSIAVPGSWSKRGHFTPSTCERF----VANGDHLESSSDPWSAWPLDQCFAENFTTETERCNQFV 139
            .:.::|.. .|.|...|..|.|:    :||...|  ..:|.....|.|...||.....|...: |
  Rat    63 RNHSIPLE-MKDGRQVPHKCRRYRLATIANFSAL--GLEPGEDVDLKQLELENCLDGWEYSKE-V 123

  Fly   140 YGSSERTIVQQWGLQCPENLWKLAFVGTIHFAGLVVGTALSGYLADRYGRKHIFLFCIVFMALTG 204
            :.|   |||.:|.|.| .:.||.....::.:.|:::|:.:||.|:||:|||.: ||..:.|. ||
  Rat   124 FLS---TIVTEWNLVC-NDAWKAPLTTSMFYVGVLLGSFISGQLSDRFGRKPV-LFWTMGMH-TG 182

  Fly   205 VA--QALSWDYISF-LFFALLNAVGTSGVYPLAFIIGVEMVGPRKREM-SSIVLNYFYAVGEALL 265
            .:  |..|.::..| |.|||: .:|....|..||::|.|::....|.: :::.:..|:|.|..:|
  Rat   183 FSFLQVFSVNFEMFTLLFALV-GMGHISNYVAAFVLGTEILSKSIRIIFATLGICIFFAFGFMVL 246

  Fly   266 GL-SVFLPDWRQLQLALSVPPLICVAYFWLVPESVRWLLARNRREQAGVIIRRAAKVNRRDISVE 329
            .| :.|:.|||.|.:|:::|.::|.|.:|.:|||.|||:::.|.::|.||||:|||.|      .
  Rat   247 PLFAYFIRDWRMLLMAITLPGVLCGALWWFIPESPRWLISQGRVKEAEVIIRKAAKFN------G 305

  Fly   330 LMASFKQQELDAETGQEDDVEGGLHVKKDDKIWLAVKEVARSHILMGRYAILLLIWAVNAIVYYG 394
            ::|.....:....|..:|   |.....:...|:    ::.|:..:.....:.:::|...::.|:|
  Rat   306 IVAPSTIFDPSETTNLQD---GNAKNTQSHHIY----DLVRTRNIRILTIMSIILWLTISVGYFG 363

  Fly   395 LSLNATSLSGNKYLNFALVCLVEIPGYSLAWLFLRRFGRRVALSGSLLLCSITCVASGFVTLAQG 459
            |||:..:|:||.|:|..|:..||:|.|.||||.|:...||.:::|||.|.....:   .:.|...
  Rat   364 LSLDTPNLNGNIYVNGFLLAAVEVPAYVLAWLLLQHVTRRYSMAGSLFLGGSVLL---ILQLVPS 425

  Fly   460 DWIPCQTGVESRHSWSCANWLVVTLFLVGKLGITSSFAVIYTFTAEMMPTVIRSGGVGVMSTFAR 524
            |.:                :|...|.:|||.||||:::::|.:|||:.|||:|:.||||.||.:|
  Rat   426 DLL----------------YLSTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASR 474

  Fly   525 FGAMLAPFVPLLASYYDPLPLLLFGTLSLVAGLLSLLLPETFNRKLPDTVEE 576
            .|::|:|:...|.:|...||.::.|:|:::..:::...||:....||||::|
  Rat   475 LGSILSPYFVYLGAYDRHLPYIVMGSLTILTAIITFFFPESSGVSLPDTIDE 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4630NP_001260948.1 2A0119 23..573 CDD:273328 177/558 (32%)
MFS 158..533 CDD:119392 124/379 (33%)
LOC303140XP_008765965.1 2A0119 12..523 CDD:273328 177/558 (32%)
MFS 123..513 CDD:119392 138/428 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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