DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4630 and Sv2c

DIOPT Version :10

Sequence 1:NP_001260948.1 Gene:CG4630 / 36458 FlyBaseID:FBgn0033809 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_113781.1 Gene:Sv2c / 29643 RGDID:619718 Length:727 Species:Rattus norvegicus


Alignment Length:599 Identity:122/599 - (20%)
Similarity:197/599 - (32%) Gaps:222/599 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 FVYGSSERTIVQQWGLQCPENLWKLAFVGTIHFAGLVVGTALSGYLADRYGRKHIFLFCIVFMAL 202
            ||..|:|..:       |..|... .::|:|.:.|::||....|.|||:.|||...|.|   |::
  Rat   174 FVLPSAETDL-------CIPNSGS-GWLGSIVYLGMMVGAFFWGGLADKVGRKQSLLIC---MSV 227

  Fly   203 TGVAQALS---WDYISFLFFALLNAVGTSGVYPLAFIIGVEMVGPRKREMSSIVLNYFYAVG--- 261
            .|....||   ..|..||...||:..|..|..|..|....|::...||......|..|:.:|   
  Rat   228 NGFFAFLSSFVQGYGFFLLCRLLSGFGIGGAIPTVFSYFAEVLAREKRGEHLSWLCMFWMIGGIY 292

  Fly   262 -EAL-------------LGLSVFLPDWRQLQLALSVPPLICVAYFWLVPESVRWLLARNRREQAG 312
             .|:             :|.:.....||...:..::|.:..|.....:|||.|:||...:.::|.
  Rat   293 ASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVALTFMPESPRFLLEVGKHDEAW 357

  Fly   313 VIIRRAAKVNRRD-------ISVELMASFKQ----QELDAETGQ---------EDDVEGGLHVKK 357
            :|::.....|.|.       .:|..:.:.||    .|::::||.         ..::.|      
  Rat   358 MILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIESDTGTWYRRCFVRIRTELYG------ 416

  Fly   358 DDKIWLAVKEV----ARSHILMGRYAILLLIWAVNAIVYYGLS----------------LNATSL 402
               |||.....    .|.:.:.     |.::|...:..|||||                |...::
  Rat   417 ---IWLTFMRCFNYPVRENTIK-----LTIVWFTLSFGYYGLSVWFPDVIKHLQSDEYALLTRNV 473

  Fly   403 SGNKYLNFA-------------------------------------------------------- 411
            ..:||.||:                                                        
  Rat   474 QKDKYANFSINFTMENQVHTGMEYDNGRFLGVKFKSVTFKDSVFKSCTFDDVTSVNTYFKNCTFI 538

  Fly   412 -------------------------------------------------LVCLVEIPGYSLAWLF 427
                                                             |..|..:||..::.|.
  Rat   539 DTLFENTDFEPYKFIDSEFQNCSFLHNKTGCQITFDDDYSAYWIYFVNFLGTLAVLPGNIVSALL 603

  Fly   428 LRRFGRRVALSGSLLLCSITCVASGFVTLAQGDWIPCQTGVESRHSWSCANWLVVTLFLVGKL-- 490
            :.|.||...|.||::|..|:|....|.|            .||              .::|.|  
  Rat   604 MDRIGRLTMLGGSMVLSGISCFFLWFGT------------SES--------------MMIGMLCL 642

  Fly   491 --GIT-SSFAVIYTFTAEMMPTVIRSGGVGVMSTFARFGAMLAPFV-PLLASYYDPLPLLLFGTL 551
              |:| |::..:...|.|:.||..|:.|.|.::...:..|:|...: ..|.|....:|:||..|:
  Rat   643 YNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITKAIPILLASTV 707

  Fly   552 SLVAGLLSLLLPET 565
            .:..||:.|.||:|
  Rat   708 LVCGGLVGLRLPDT 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4630NP_001260948.1 2A0119 23..573 CDD:273328 122/599 (20%)
Sv2cNP_113781.1 synapt_SV2 1..727 CDD:130366 122/599 (20%)
Interaction with SYT1. /evidence=ECO:0000269|PubMed:15866046 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..120
(Microbial infection) C.botulinum neurotoxin type A-binding. /evidence=ECO:0000269|PubMed:16543415, ECO:0000269|PubMed:27294781 529..566 0/36 (0%)
Blue background indicates that the domain is not in the aligned region.

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