DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4630 and SPCC2H8.02

DIOPT Version :9

Sequence 1:NP_001260948.1 Gene:CG4630 / 36458 FlyBaseID:FBgn0033809 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_587972.1 Gene:SPCC2H8.02 / 2538980 PomBaseID:SPCC2H8.02 Length:583 Species:Schizosaccharomyces pombe


Alignment Length:610 Identity:132/610 - (21%)
Similarity:233/610 - (38%) Gaps:200/610 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 DPWSAWPLDQCFAENFTTETERCNQFVYGSSERTIVQQWGLQCPENLWKLAFVGT---------- 167
            :|:|..|.|:   |....|.       |.:||:.|:   ||...:....||..||          
pombe     6 NPFSKKPKDE---EPLPLEQ-------YEASEQKIL---GLVTKKEAKLLAIAGTGFLLDSYDLF 57

  Fly   168 -----------IHFAGL----------------------VVGTALSGYLADRYGRKHIF------ 193
                       :::.||                      ::|..|.|:|.|.:|||.::      
pombe    58 IINLVSPILAYLYWGGLTGHQDYPSGIRGVVNAATNIGNIMGQLLFGFLGDFFGRKFVYGKEMMV 122

  Fly   194 -------LFCIVFMALTGVAQALSWDYISFLF-FALLNAVGTSGVYPLAFIIGVE--MVGPRKRE 248
                   :.|:.....|..|: :.|     || |.::..:|..|.||::..|..|  ::..|...
pombe   123 VIIATILIICLPDRIPTPTAK-MMW-----LFAFRVMLGIGIGGDYPMSASITSEQSLINRRGAL 181

  Fly   249 MSSIVLNYFYAV----GEALLGLSVF---LPD----------WRQLQLALSVPPLICVAYFWLVP 296
            ::.|..|..:..    ...|:.|:.|   |.|          || :|..:::.|.:.|    |:|
pombe   182 LAWIFSNQGWGTLAGCVATLIILACFEKPLNDRGEYTKLNGVWR-IQFGIALFPAVIV----LIP 241

  Fly   297 -----ESVRWLLARNRREQAGVIIRRAAKVNRRDISVELMASFKQQELDAE-------TGQEDDV 349
                 ||.::..::|.:......:..|:::...|..       |::.|.||       |....|.
pombe   242 RLRMQESEQFKNSKNMKSPGEGDLDSASQIELHDFK-------KKESLTAEFTTSSPSTASLSDK 299

  Fly   350 E--GGLHVKKDDKI-----------WLAVK---EVARSHILMG----------RYAILL----LI 384
            :  |.:|::.::::           ..:|:   |...|.|..|          |:|.||    |.
pombe   300 KNPGSVHIRPNNEVAPSSAPSRAPSTTSVESNTEGKESDIQTGSSFVSYFKEWRHAKLLIGSALS 364

  Fly   385 WAVNAIVYYGLSLNAT----------------SLSGNKYLNFALVCLVEIPGYSLAWLFLRRFGR 433
            |.:..|.:||::||.:                .|..|...|..:.....||||.::.:.:...||
pombe   365 WFLLDIAFYGINLNQSVILQEMGFNKGVNEYHILQKNAIGNLIIAVAGYIPGYWVSVVLIEVMGR 429

  Fly   434 R-VALSGSLLLCSITCVASGFVTLAQGDWIPCQTGVESRHSWSCANWLVVTLFLVGKLGITSSFA 497
            : :.:.|.|:.|.:      |..|| |.|....||    ..::|   :.:..|.......|:.|.
pombe   430 KWIQIQGFLICCLL------FGVLA-GTWETISTG----GRFAC---VALAQFFFNFGPNTTCFV 480

  Fly   498 VIYTFTAEMMPTVIRSGGVGVMSTFARFGAMLAPFVPLLASYYDPLPLLL-FGTL------SLVA 555
            :    .||:.|:.:|:...|:.:...:.||:|:      |..::.|..:: ||.:      .:||
pombe   481 I----PAEVFPSRVRAFSHGICAACGKAGAILS------ALLFNKLTEVIGFGNVLWIFFGCMVA 535

  Fly   556 G-LLSLLLPETFNR--KLPDTVEEA 577
            | :::|:||||.||  .|.|.:|.|
pombe   536 GAVVTLILPETANRDADLIDRLEIA 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4630NP_001260948.1 2A0119 23..573 CDD:273328 129/604 (21%)
MFS 158..533 CDD:119392 102/509 (20%)
SPCC2H8.02NP_587972.1 2A0109 38..557 CDD:129965 118/560 (21%)
MFS 42..544 CDD:119392 110/543 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
TreeFam 00.000 Not matched by this tool.
11.000

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