DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4630 and Slc22a1

DIOPT Version :10

Sequence 1:NP_001260948.1 Gene:CG4630 / 36458 FlyBaseID:FBgn0033809 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_036829.1 Gene:Slc22a1 / 24904 RGDID:3224 Length:556 Species:Rattus norvegicus


Alignment Length:580 Identity:173/580 - (29%)
Similarity:276/580 - (47%) Gaps:63/580 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DDILVEIGEFGRFQRRNYLLICLPVLFAAANSLSYVFTAGSPTYRCYVPECDKLVDAEYGANW-- 78
            ||:|.::||||.||::.:||:||.....|...:..||...:|.:.|..|   .:.:......|  
  Rat     5 DDVLEQVGEFGWFQKQAFLLLCLISASLAPIYVGIVFLGFTPGHYCQNP---GVAELSQRCGWSQ 66

  Fly    79 ---VSIAVPG-SWSKRGHFTPSTCERFVANGDHLESSSDPWSAWPLDQCFAENFTTETERCNQ-F 138
               ::..||| ..|....|. |.|.|:..  |..:|:.|  ...||....|.........|.. :
  Rat    67 AEELNYTVPGLGPSDEASFL-SQCMRYEV--DWNQSTLD--CVDPLSSLVANRSQLPLGPCEHGW 126

  Fly   139 VYGSSERTIVQQWGLQCPENLWKLAFVGTIHFAGLVVGTALSGYLADRYGRKHIFLFCIVFMALT 203
            ||.:...:||.::.|.|.: .||:....:....|..:|:.:.||:|||:|||...|...:..:::
  Rat   127 VYDTPGSSIVTEFNLVCGD-AWKVDLFQSCVNLGFFLGSLVVGYIADRFGRKLCLLVTTLVTSVS 190

  Fly   204 GVAQALSWDYISFLFFALLNAVGTSGVYPLAFIIGVEMVGPRKREMSSIVLNYFYAVG-EALLGL 267
            ||..|::.||.|.|.|.||..:.:.|.:...:.:..|.||...|..::|:....:.|| ..|.|:
  Rat   191 GVLTAVAPDYTSMLLFRLLQGMVSKGSWVSGYTLITEFVGSGYRRTTAILYQMAFTVGLVGLAGV 255

  Fly   268 SVFLPDWRQLQLALSVPPLICVAYFWLVPESVRWLLARNRREQAGVIIRRAAKVNRR----DISV 328
            :..:||||.||||:|:|..:.:.|:|.||||.||||::.|..:|..|:.:.|:.|.:    |:.:
  Rat   256 AYAIPDWRWLQLAVSLPTFLFLLYYWFVPESPRWLLSQKRTTRAVRIMEQIAQKNGKVPPADLKM 320

  Fly   329 ELMASFKQQELDAETGQEDDVEGGLHVKKDDKIWLAVKEVARSHILMGRYAILLLIWAVNAIVYY 393
            ..:              |:|.        .:|...:..::.|:..|.....||:.:|...|::|.
  Rat   321 LCL--------------EEDA--------SEKRSPSFADLFRTPNLRKHTVILMYLWFSCAVLYQ 363

  Fly   394 GLSLNATSLSGNKYLNFALVCLVEIPGYSLAWLFLRRFGRRVALSGSLLLCSITCVASGFVTLAQ 458
            ||.::..:...|.||:|....|||.|...:..:.:.|.||...::.|.|:....|:...|:.   
  Rat   364 GLIMHVGATGANLYLDFFYSSLVEFPAAFIILVTIDRIGRIYPIAASNLVTGAACLLMIFIP--- 425

  Fly   459 GDWIPCQTGVESRHSWSCANWLVVTLFLVGKLGITSSFAVIYTFTAEMMPTVIRSGGVGVMSTFA 523
                         |.   .:||.|||..:|::|.|....::....||:.||.||:.|:.|.|...
  Rat   426 -------------HE---LHWLNVTLACLGRMGATIVLQMVCLVNAELYPTFIRNLGMMVCSALC 474

  Fly   524 RFGAMLAPFVPL-LASYYDPLPLLLFGTLSLVAGLLSLLLPETFNRKLPDTVEEAIALGK 582
            ..|.:..||:.. |...:..|||:|||.|.|.||.::||||||....||:|:|||..||:
  Rat   475 DLGGIFTPFMVFRLMEVWQALPLILFGVLGLTAGAMTLLLPETKGVALPETIEEAENLGR 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4630NP_001260948.1 2A0119 23..573 CDD:273328 164/562 (29%)
Slc22a1NP_036829.1 2A0119 12..525 CDD:273328 164/562 (29%)
Proline-rich sequence. /evidence=ECO:0000250|UniProtKB:O15245 284..288 3/3 (100%)

Return to query results.
Submit another query.