DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4630 and pes-23

DIOPT Version :9

Sequence 1:NP_001260948.1 Gene:CG4630 / 36458 FlyBaseID:FBgn0033809 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_509167.2 Gene:pes-23 / 180963 WormBaseID:WBGene00003987 Length:520 Species:Caenorhabditis elegans


Alignment Length:479 Identity:100/479 - (20%)
Similarity:186/479 - (38%) Gaps:90/479 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 GDHLESSSDPWSAWPLDQCFAENFTTETERCN-----QFVYGSSERTIVQQWGLQCPEN---LWK 161
            |..|:|:.|              :..:.||.:     :|:..|:..:...|| :....|   || 
 Worm    32 GQQLKSTDD--------------YLQQAERVSKNDFYRFINNSNFYSTHAQW-ITDDTNVSVLW- 80

  Fly   162 LAFVGTIHFAGLVVGTALSGYLADRYGRKHIFLFCIVFMALTGVAQALSWDYISFLFFALLNAVG 226
            ...|..|...|:.||:.|.||::|.:||:.:..:.::..::..:.:......|.......:....
 Worm    81 WENVIAIQQVGIFVGSILFGYISDHFGRQKVCQYSLLISSVILLVEGFLSSTILIALCRFIIGTQ 145

  Fly   227 TSGVYPLAFIIGVEMVGPRKREMSSIVLNYFYAVGEALLGLSVFL-PDWRQLQLALSVPPLICVA 290
            |..:..:::.:..|::.||.|.::....|  :..|:..|.|..|. .:||   ::|.|    |.|
 Worm   146 TGAIIVVSWSLTTELISPRTRFLARAFAN--WPTGKFALALICFFSQNWR---ISLHV----CAA 201

  Fly   291 --------YFWLVPESVRWLLARNRREQAGVIIRRAAKVNRRDISVELMASFKQQELDAETGQED 347
                    |.:.||||..:|....:|.:|..|:....|.:.....:.|....:.:.|...     
 Worm   202 FTLFGALLYIFFVPESPTYLQCHGKRTEAHNIVADVFKNSNGKCVIALPGGIRSKPLTFR----- 261

  Fly   348 DVEGGLHVKKDDKIWLAVKEVARSHIL-------MGRYAILLLIWAVNAIVYYGLSLNATSLSGN 405
                        :||  .||..|:.|:       |..:...:|.::...|.:..|.|:...|:|.
 Worm   262 ------------QIW--KKEKYRNVIILFGSIWVMTNFTATMLDFSEVIIFHNNLILSQMLLAGV 312

  Fly   406 KYLNFALVCLVEIPGYSLAWLFLRRFGRRVALSGSLLLCSITCVASGFVTLAQGDWIPCQTGVES 470
            ..:...|:.||||        :.....||.....||.:..|:..|||.:.|         .|::.
 Worm   313 PAICKILLGLVEI--------YFGIISRRNLHLISLCINGISMCASGVLIL---------FGLQK 360

  Fly   471 RHSWSCANWLVVTLFLVGKLGITSSFAVIYTFTAEMMPTVIRSGGVGVMSTFARFGAMLAPFVPL 535
            .:.     .:.|.:||:|...|...:...|....|.:||.:|....|..|..:|...:||..:.:
 Worm   361 NYP-----TIYVLVFLIGYASIEFIWDACYLCVVEQVPTEVRGTISGACSFLSRLSGILASKMTI 420

  Fly   536 LASYYDPLPLLLFGTLSLVAGLLS 559
            :...::|.||.:....:::..|::
 Worm   421 VKQRWEPAPLFIAFATAIIHFLIA 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4630NP_001260948.1 2A0119 23..573 CDD:273328 100/479 (21%)
MFS 158..533 CDD:119392 86/393 (22%)
pes-23NP_509167.2 2A0119 <82..458 CDD:273328 87/413 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.