DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4630 and B0252.3

DIOPT Version :9

Sequence 1:NP_001260948.1 Gene:CG4630 / 36458 FlyBaseID:FBgn0033809 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001021888.1 Gene:B0252.3 / 174130 WormBaseID:WBGene00015088 Length:484 Species:Caenorhabditis elegans


Alignment Length:594 Identity:150/594 - (25%)
Similarity:258/594 - (43%) Gaps:152/594 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 APAAG-----------AASAVLDFDDILVEIGEFGRFQRRNYLLICLPVLFAAANSLSYVFTAGS 56
            ||:.|           ::|..|..||:|..:.:..|     ::|.|:.|...|.:.|:  ||...
 Worm     6 APSDGSLGDYTYQQDMSSSDKLSADDVLNTLDKSNR-----HILTCILVCGLAWSPLA--FTGLC 63

  Fly    57 PTYRCYVPECDKLVDAEYGANWVSIAVPGSWSKRGHFTPSTCERFVANGDHLESSSDPWSAWPLD 121
            |::         :|.|...::::.:|                :.|...||         ::|   
 Worm    64 PSF---------VVKASENSSFIGVA----------------DEFDLTGD---------ASW--- 91

  Fly   122 QCFAENFTTETERCNQFVYGSSERTIVQQWGLQCPENLWKLAFVGTIHFAGLVVGTALSGYLADR 186
              .||:.|                                     |.:..|.::|......|||.
 Worm    92 --LAESTT-------------------------------------TFYMVGNMIGGMFIPPLADH 117

  Fly   187 YGRKHIFLFCIVFMALTGVAQALSWDYISFLFFALLNAVGTSGVYPLAFIIGVEMVGPRKREMSS 251
            |||..:|:..::.||:.|:..|.|...:.|....:::.:..:......:::|.|....|.|..:|
 Worm   118 YGRLPVFVATVLLMAVGGMISAFSTSIMMFCIMRMIHGIFYTAAGLAGWVLGYENTPLRLRFFTS 182

  Fly   252 IVLNYFYAVGEALLGLSVF-LPDWRQLQLALSVPPL-ICVAYFWLVPESVRWLLARNRREQAGVI 314
            :.....:.||...|||..: |||||.|...:|||.: :.:..:..||||:.:|::..:.|:.   
 Worm   183 VYFGVMWVVGACFLGLLAYILPDWRYLMFCISVPNIFVALLIYMTVPESLHFLVSSQQNEKI--- 244

  Fly   315 IRRAAKVNRRDISVELMASFKQQELDAETGQEDDVEGGLHVKKDDKIWLAVKEVAR---SHILMG 376
                                 :..|:...|.:.|:.....|:..|:...:.|.:.|   .|.:..
 Worm   245 ---------------------EAWLEKIRGPKGDISASDIVEDRDENGSSFKTLCREMWKHKMFI 288

  Fly   377 RYAILL-LIWAVNAIVYYGLSLNATSLSGNKYLNFALVCLVEIPGYSLAWLFLRRFGRRVALSGS 440
            .|.::: .||.|:..:|:||:..:|:|:||.||||.|:.|||.|.|..:.:|:.::||:|.:||:
 Worm   289 VYVLVMTYIWIVDTFIYFGLAFYSTNLAGNLYLNFVLMSLVEAPAYIFSPIFMNKYGRKVLISGT 353

  Fly   441 LLLCSITCVASGFVTLAQGDWIPCQTGVESRHSWSCANWLVVTLFLVGKLGITSSFAVIYTFTAE 505
            .::..::     |:.:           |.|..:|....|      |:||..|:.||..||.|.:|
 Worm   354 HIIAGLS-----FLGI-----------VLSSEAWHIHFW------LLGKFAISCSFMSIYMFASE 396

  Fly   506 MMPTVIRSGGVGVMSTFARFGAMLAPFVPLLASYYDPLPLLLFGTLSLVA---GLLSLLLPETFN 567
            :.||..|:..:|...|.:|||.||:|::..|.:.:...|.:   ||||:|   |||:|:||||.|
 Worm   397 IFPTDGRNKCIGFCETLSRFGGMLSPYLSHLTAVHALAPAI---TLSLIAVSGGLLTLILPETLN 458

  Fly   568 RKLPDTVEE 576
            .|||.|:.|
 Worm   459 TKLPSTIAE 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4630NP_001260948.1 2A0119 23..573 CDD:273328 140/558 (25%)
MFS 158..533 CDD:119392 102/380 (27%)
B0252.3NP_001021888.1 MFS 87..454 CDD:119392 119/466 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106230
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.910

Return to query results.
Submit another query.