DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4630 and sv2b

DIOPT Version :9

Sequence 1:NP_001260948.1 Gene:CG4630 / 36458 FlyBaseID:FBgn0033809 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_002933355.1 Gene:sv2b / 100497731 XenbaseID:XB-GENE-6041859 Length:711 Species:Xenopus tropicalis


Alignment Length:697 Identity:126/697 - (18%)
Similarity:216/697 - (30%) Gaps:259/697 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 ECDKLVDAEYGANWVSIAVPGSWSKRGHFTPSTCERFVANGDHLESSSDPWSAWPLDQCFAENFT 129
            |.|::.:.||.      .:|.....|.|...|..:.|          .||      ....||...
 Frog    72 EDDEIYEGEYQ------GIPHPDDLRQHKASSIRDEF----------KDP------ADIIAERIE 114

  Fly   130 TETERCNQFVYGSSERTIVQ-------QWGLQCPENLWKLA------------------------ 163
            .|.:...|:      ..|:|       ||.|.....|..:|                        
 Frog   115 DEEQLAYQY------ENIIQECGHGRFQWTLFVVLGLALMADGVEVFVVGFVLPSAEKDMCLSRS 173

  Fly   164 ---FVGTIHFAGLVVGTALSGYLADRYGRKHIFLFCIVFMALTGVAQALSWDYISFLFFALLNAV 225
               .:|.|.:.|:::|..:.|.|||:.|||...:..:...|......:....|..|||..|::..
 Frog   174 NKGMLGLIVYLGMMLGAFVWGGLADKVGRKKCLIISLTINAAFSFVSSFVQGYGLFLFCRLISGF 238

  Fly   226 GTSGVYPLAFIIGVEMVGPRKREMSSIVLNYFYAVGEAL-----------------LGLSVFLPD 273
            |..|..|:.|....|.:...||......|..|:.:|...                 :|.......
 Frog   239 GIGGSLPIVFAYFSEFLAREKRGEHLSWLCMFWMIGAVYAAAMAWSIIPHYGWGFSMGTHYHFHS 303

  Fly   274 WRQLQLALSVPPLICVAYFWLVPESVRWLLARNRREQAGVIIRRAAKVNRRD-------ISVELM 331
            ||...:...:|.:..:.....:|||.|:||...:.::|.:|::.....|.|.       .:|..:
 Frog   304 WRVFVVICVLPCIASIIALKFMPESPRFLLETGKHDEAWMILKNIHDTNMRAKGEPEKVFTVSHI 368

  Fly   332 ASFKQQ----ELDAETG---QEDDVEGGLHVKKDDKIWLAVKEVARS--HILMGRY----AILLL 383
            .:.||.    |:.:.||   |...|          :|...:|::..:  |...|::    ..|.:
 Frog   369 KTPKQPDEFIEIQSSTGTWFQRWFV----------RIMTVIKQIWENMLHCFSGQFRKNTIFLAV 423

  Fly   384 IWAVNAIVYYGLSL------------------------NATSLSGN------------------- 405
            :|...::.||||::                        |..:.:.|                   
 Frog   424 VWFTMSLSYYGLTVWFPDTIRYLQDEDYASKVKRFTDENVKNFNFNFTLENQIHEDGEYYNDRFY 488

  Fly   406 ----KYLNFA------------------------------------------------------- 411
                ||:.|.                                                       
 Frog   489 KMKLKYVTFKDSLFDECYFEDVTSTGSIFENCTIQNTVFYNTDLYQHKFIDCNFINVTFSQPKEG 553

  Fly   412 -----------LVCLVE-------IPGYSLAWLFLRRFGRRVALSGSLLLCSITCVASGFVTLAQ 458
                       |:.||.       :||..::.|.:.:.||...::||:|:.::.|.   |:....
 Frog   554 CHIDFEEDNDFLIYLVSFLGSLSVLPGNIISALLMDKIGRIRMIAGSMLISAVCCF---FLFFGN 615

  Fly   459 GDWIPCQTGVESRHSWSCANWLVVTLFLVGKLGITSSFAVIYTFTAEMMPTVIRSGGVGVMSTFA 523
            .:        .:...|.|       ||....:...::..|:   |.|:.||..|:...|:::...
 Frog   616 SE--------SAMIGWQC-------LFCGTSIAAWNALDVV---TVELYPTNKRATAFGILNGLC 662

  Fly   524 RFGA-----MLAPFVPLLASYYDPLPLLLFGTLSLVAGLLSLLLPET 565
            :..|     :.|.||.:.    ..:|:||..|..:..||:||.||||
 Frog   663 KLAAIFGNSIFASFVGIT----KVIPILLASTALVGGGLISLRLPET 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4630NP_001260948.1 2A0119 23..573 CDD:273328 126/697 (18%)
MFS 158..533 CDD:119392 92/563 (16%)
sv2bXP_002933355.1 synapt_SV2 1..711 CDD:130366 126/697 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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