DRSC/TRiP Functional Genomics Resources

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Protein Alignment FLASH and Casp8ap2

DIOPT Version :10

Sequence 1:NP_610845.1 Gene:FLASH / 36455 FlyBaseID:FBgn0033806 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_001101391.1 Gene:Casp8ap2 / 313128 RGDID:1305771 Length:1962 Species:Rattus norvegicus


Alignment Length:1029 Identity:199/1029 - (19%)
Similarity:348/1029 - (33%) Gaps:337/1029 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LYDIEPAGSKKPDQMDRSLELDIYDDLD------------DFQKA----EDRNTKELQAWEAKYE 99
            |:|:.||...|.:...   .||||..||            .|:..    |:..|:|..|.||.|.
  Rat    13 LFDVCPASPLKNNDEG---SLDIYAGLDSTVSDSTARSCVSFRNCLDLYEEILTEEGTAKEATYS 74

  Fly   100 KALAEIEALKVENKALGKK---IKTMEVNLQN-----------LLDTAKAEVKRKETLIAEL--- 147
            ....|....:.:.|.|.|:   |:|..:||:|           |:.||:.|:.||:..|..|   
  Rat    75 DLQIEYGKCQQQMKDLMKRFKEIQTQNLNLKNENQSLKKNISALIKTARVEINRKDEEINHLHQR 139

  Fly   148 -------RNE------KD--------DVCFRRKRARAFDV-----PGAREP----ESKRPKEFQS 182
                   ||.      ||        |.|.:.......||     |...:|    |.|...|.|:
  Rat   140 LSEFPHFRNNHKTARTKDSRSKSPHLDNCSKTDHGVKSDVQKDIHPNTSQPNLEKEGKSHSEAQN 204

  Fly   183 T---PIDVRKYPETN---RNPFKTAAKDAAKDDAR--------KMMTKKDDTTKVVSKDVERG-- 231
            :   ...:.|:...|   |:|::.:..::.:|:.|        :.....|.|.|.::.....|  
  Rat   205 SLHLSTGIEKHCTNNVWSRSPYQVSEGNSNEDNRRGRNGVRHSQGSRGTDRTQKDLNSSCNDGEP 269

  Fly   232 ------------------VKSKEDNKMATNKDD---DKKSSSKDDAWKSRTREDA---------- 265
                              .:::.:||::..|..   ..||.....:|:..|..:.          
  Rat   270 RDKEAASRLHGNPEKHGSSEARAENKISEIKSSTGLGNKSERSASSWEKETSRERPHTRVEPQND 334

  Fly   266 --------------KKSVQ-RSKSPR-----------------------PEHSKTTDRKSTAQAR 292
                          :|.:| :.|:.|                       |.|||...:.......
  Rat   335 KNLERQNERLQNTHRKELQSQDKAERKGDVKFKPAGEEQGHRGRVDRALPPHSKNDMKYYGFNKY 399

  Fly   293 RPDPHRSRSPKHNSRRDH----HRNQE---SSSRHAKRRSQSASPSKIQLPREKANAIITL---- 346
            .|:..|.|   .:.:||.    |..|:   |||..:.|.|:.....::.:..:..|.....    
  Rat   400 HPEERRGR---EDGKRDRGMSSHGFQDRRCSSSLSSNRNSKYPHSKEVSVAHQWENTPFKAERHR 461

  Fly   347 TDDETNDQRSKSPVPVTVKLVTESQPAEKVVSNRRDAALETNANSSKESK-------VETKDITQ 404
            |:|....:|........||...:| |.|.:....:|....| ||..::::       |.|.::::
  Rat   462 TEDRRKRERENKEESRHVKSDKKS-PPEHLQRTHKDTKKST-ANGKRQTEQKHGKGPVSTSELSK 524

  Fly   405 PTNGLIAEPCIPKHEIIPG------LSLINPESADFSKNEIKLDPVILQDRTEDSGHQLLNKEPI 463
            .|:.   ..|..|.|..|.      |.|...|..:.:.:..|..||     .:|:.||::.   :
  Rat   525 GTDN---RECTMKVENGPNEAKGKDLKLSFMEKLNLTLSPAKKQPV-----CQDNEHQIIG---V 578

  Fly   464 PKVVVLEKCKNILAEDCPA---DEQPLDKFK--------DGKESEETQAKL-DKKEPFAVETAVE 516
            ||               |:   |.|.|:|.:        ..::.||.:::| :.||..:..:...
  Rat   579 PK---------------PSGVCDSQSLEKTETVACLPSVSEQDREEPKSELPEPKEALSATSQPR 628

  Fly   517 T--PSKEESNDNIVLSKNTTSQADVCSQHDENDEAEIREPMD--------QVNSVVESDLGVRII 571
            |  |..:...:|.:|.|:..:... |.......|.....|::        |...|.|:..|.|..
  Rat   629 TSIPENKVKEENRLLFKSVENTVP-CELLACGTEISFPAPVEIEQARCLVQSMEVEETCAGARAA 692

  Fly   572 EDI---RLPKMANID---------HFAVK---VDNHGEAPAAVTDSALNQENLATQDQKICAEMK 621
            ..:   .||:.|:.|         |..:.   :...|:....::..|     .|..:..:...::
  Rat   693 ASVVMRVLPEHASEDFSQELGTKRHDDINSCDISEGGKKKVVLSPKA-----AAASESHLEPVVE 752

  Fly   622 DPTIFTTSDETPIKSATILYAKPDSTKLDHSDEHDEVILETAIDMLKKEQDAASTAESTYPKLRI 686
            :|:|      :|:..:              .|.:.:  ||.:::...|.::.:|..|...||   
  Rat   753 EPSI------SPVNCS--------------GDNNPK--LEPSLEERPKVENKSSPLEPCLPK--- 792

  Fly   687 AEDAIEMALEQLHQQSPDET------VVTSTSNRAPQ-TPKSLITI----LTQTPKQADPLRSQT 740
                      ::...||.:|      :.|..||...| ...|:::|    |...|:...||.|..
  Rat   793 ----------EMFVPSPQKTELIDHKIDTGESNSVYQDDDNSVLSIDFNNLRPIPEPISPLNSPV 847

  Fly   741 KSKTVSPMATPKKTATEKTPVKKRKVNMDSSPQVPAHDVT------IDETLGACSLQ-----DES 794
            :                  ||.| .::|:||..:|.:|.:      .:.||.....|     :..
  Rat   848 R------------------PVSK-VLSMESSCTIPLYDSSHKDEFPSNSTLSTFKSQSDLNKENE 893

  Fly   795 STVTK--RCS-------LGHTDYQYEQIK--DEVILRVKRRGRRRKP-TPMEIP 836
            ..|.|  :||       |...:.:..:|:  ||..:..||..:..:| |..|:|
  Rat   894 KPVPKLDKCSEAESCKNLSVDELEEGEIRSDDEESVAQKRLEKSARPRTSTEVP 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FLASHNP_610845.1 None
Casp8ap2NP_001101391.1 ADIP <70..142 CDD:463295 20/71 (28%)
CASP8AP2 1896..1960 CDD:213401
Blue background indicates that the domain is not in the aligned region.

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