DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt-I and SPTLC2

DIOPT Version :9

Sequence 1:NP_610842.1 Gene:Spt-I / 36448 FlyBaseID:FBgn0086532 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_004854.1 Gene:SPTLC2 / 9517 HGNCID:11278 Length:562 Species:Homo sapiens


Alignment Length:506 Identity:141/506 - (27%)
Similarity:233/506 - (46%) Gaps:82/506 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FNEIGSIFRNTPTFALVLETLLLITVIWLLLHRRGGGRRRQLTK-------EEEDRIIADYEPEP 64
            |||   .|..||....|| |.:...|:.|..:.|...|..::.|       ||:...::.|:   
Human    59 FNE---AFEETPMLVAVL-TYVGYGVLTLFGYLRDFLRYWRIEKCHHATEREEQKDFVSLYQ--- 116

  Fly    65 LVADTDPNHPLLHTRVVQSRV------------GKRIQV---DGHD--------------CLNLG 100
                   :....:||.:..|:            |.|:.:   ..||              .:|:|
Human   117 -------DFENFYTRNLYMRIRDNWNRPICSVPGARVDIMERQSHDYNWSFKYTGNIIKGVINMG 174

  Fly   101 SHNYLGFLEDQEILEE-ACKSLRKYGVGSCGPRGFYGTMDVHLDLEDRIAKFMGLEEAIVYSYGF 164
            |:|||||..:....:| |.|.|.:||.|.|..|...|.:|.|.:||:.:|:|:|:|.|:.|..||
Human   175 SYNYLGFARNTGSCQEAAAKVLEEYGAGVCSTRQEIGNLDKHEELEELVARFLGVEAAMAYGMGF 239

  Fly   165 STVASAIPAYAKRGDLIFVDEAVNFAIQKGLDASRSTIVFFKHNDVEDLERLLIEQEKRDQKNPK 229
            :|.:..|||...:|.||..||..:.::..|...|.:||..||||:::.||:||.:.....|...:
Human   240 ATNSMNIPALVGKGCLILSDELNHASLVLGARLSGATIRIFKHNNMQSLEKLLKDAIVYGQPRTR 304

  Fly   230 KAAKTRRFLVAEGIYMNTGEICPLPDLVALRQKYKLRLFIDESISFGTLGQGGHGVTEHFNVDRD 294
            :..| :..::.||||...|.|..||:::||::|||..|::||:.|.|.||..|.||.|:|.:|.:
Human   305 RPWK-KILILVEGIYSMEGSIVRLPEVIALKKKYKAYLYLDEAHSIGALGPTGRGVVEYFGLDPE 368

  Fly   295 EVDLISAGMEGSMATVGGFCVGSHFIAEHQRLSGLGYIFSASLPPMLTQAAISAL------DRFE 353
            :||::......|....||:..|...:.::.|......:::.||.|.:.:..|:::      |...
Human   369 DVDVMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSLSPPVVEQIITSMKCIMGQDGTS 433

  Fly   354 REPQIFEQLQAKSKTLHQKFLRFSKLTLRGDEVSPVKHLYLAQPAE--NFDKELKLLTELADKCI 416
            ...:..:|| |::....::.|:.....:.|:|.|||..|.|..||:  .|.:|:          :
Human   434 LGKECVQQL-AENTRYFRRRLKEMGFIIYGNEDSPVVPLMLYMPAKIGAFGREM----------L 487

  Fly   417 ARGVAVVQAAYLQNRERQPVRPSIRIAVNRLLESSE----IDNAFEVIESV 463
            .|.:.||...:       |..|.|.......|.::.    :|.|.:.|:.|
Human   488 KRNIGVVVVGF-------PATPIIESRARFCLSAAHTKEILDTALKEIDEV 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt-INP_610842.1 AAT_I 22..468 CDD:302748 135/491 (27%)
BioF 79..463 CDD:223234 122/425 (29%)
SPTLC2NP_004854.1 AAT_I 67..542 CDD:418510 136/495 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0156
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312139at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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