DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt-I and SPTLC3

DIOPT Version :10

Sequence 1:NP_610842.1 Gene:Spt-I / 36448 FlyBaseID:FBgn0086532 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_060797.2 Gene:SPTLC3 / 55304 HGNCID:16253 Length:552 Species:Homo sapiens


Alignment Length:397 Identity:113/397 - (28%)
Similarity:185/397 - (46%) Gaps:66/397 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DCLNLGSHNYLG----FLEDQEILEEACKSLRKYGVGSCGPRGFYGTMDVHLDLEDRIAKFMGLE 155
            |.:|:||:|:||    :.|....:::.   |..||.|....|...||:|.|.:|||.:|||:.:|
Human   161 DVINMGSYNFLGLAAKYDESMRTIKDV---LEVYGTGVASTRHEMGTLDKHKELEDLVAKFLNVE 222

  Fly   156 EAIVYSYGFSTVASAIPAYAKRGDLIFVDEAVNFAIQKGLDASRSTIVFFKHNDVEDLERLLIEQ 220
            .|:|:..||:|.:..|||...:|.||..||..:.::..|...|.:||..||||:.:.||:||.:.
Human   223 AAMVFGMGFATNSMNIPALVGKGCLILSDELNHTSLVLGARLSGATIRIFKHNNTQSLEKLLRDA 287

  Fly   221 EKRDQKNPKKAAKTRRFLVAEGIYMNTGEICPLPDLVALRQKYKLRLFIDESISFGTLGQGGHGV 285
            ....|...::|.| :..::.||:|...|.|..||.::||::|||..|:|||:.|.|.:|..|.||
Human   288 VIYGQPRTRRAWK-KILILVEGVYSMEGSIVHLPQIIALKKKYKAYLYIDEAHSIGAVGPTGRGV 351

  Fly   286 TEHFNVDRDEVDLISAGMEGSMATVGGFCVGSHFIAEHQRLSGLGYIFSASLPPMLTQAAISA-- 348
            ||.|.:|..|||::......|....||:..|...:.::.|:.....::::|:.|.:.:..|.:  
Human   352 TEFFGLDPHEVDVLMGTFTKSFGASGGYIAGRKDLVDYLRVHSHSAVYASSMSPPIAEQIIRSLK 416

  Fly   349 ----LDRFEREPQIFEQLQAKSKTLHQKFLRFSKLTLRGDEVSPVKHLYLAQPA----------- 398
                ||...:..|..:||...::...|: |:.....:.|:|.:.|..|.|..|.           
Human   417 LIMGLDGTTQGLQRVQQLAKNTRYFRQR-LQEMGFIIYGNENASVVPLLLYMPGKVAAFARHMLE 480

  Fly   399 ------------------------------ENFDKELKLLTELADKCIARGVAVVQAAYLQNRER 433
                                          |..|..|:.|.|:.|        ::|..|  :|.:
Human   481 KKIGVVVVGFPATPLAEARARFCVSAAHTREMLDTVLEALDEMGD--------LLQLKY--SRHK 535

  Fly   434 QPVRPSI 440
            :..||.:
Human   536 KSARPEL 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt-INP_610842.1 AAT_I 22..468 CDD:450240 113/397 (28%)
SPTLC3NP_060797.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
AAT_I 57..549 CDD:450240 113/397 (28%)
Blue background indicates that the domain is not in the aligned region.

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