DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt-I and gcat

DIOPT Version :10

Sequence 1:NP_610842.1 Gene:Spt-I / 36448 FlyBaseID:FBgn0086532 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001166025.1 Gene:gcat / 402822 ZFINID:ZDB-GENE-060518-3 Length:431 Species:Danio rerio


Alignment Length:392 Identity:108/392 - (27%)
Similarity:183/392 - (46%) Gaps:45/392 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 RVVQSRVGKRIQVDGH--DCLNLGSHNYLGFLEDQEILEEACKSLRKYGVGSCGPRGFYGTMDVH 141
            ||:.|:.|..|.|||.  |.||..::||||.....|:::...::|:|||.|....|...||.|:|
Zfish    60 RVITSKQGPHICVDGSRGDILNFCANNYLGLSSHPEVVKAGVEALQKYGAGLSSVRFICGTQDIH 124

  Fly   142 LDLEDRIAKFMGLEEAIVYSYGFSTVASAIPAYAKRGDLIFVDEAVNFAIQKGLDASRSTIVFFK 206
            .:||:::|:|...|:.|:|:..|...|..........|.:..||..:.:|..|:...|:....:|
Zfish   125 KNLEEKLAQFHEREDCILYASCFDANAGLFEVLLGPDDAVLSDELNHASIIDGIRLCRAKRFRYK 189

  Fly   207 HNDVEDLERLLIEQEKRDQKNPKKAAKTRRFLVAEGIYMNTGEICPLPDLVALRQKYKLRLFIDE 271
            |.|:.|||..|.|.:          :...|.:|.:|::...|::.||..:..|.::|...:||||
Zfish   190 HMDLNDLEEKLKESQ----------SSRLRLVVTDGVFSMDGDVAPLKGICDLAEQYGAMVFIDE 244

  Fly   272 SISFGTLGQGGHGVTEHFNVDRDEVDLISAGMEGSM-ATVGGFCVGSHFIAEHQRLSGLGYIFSA 335
            ..:.|.:|..|.|..|...| .|.|.::::.:..:: ...||:.||...:.|..|.....|:||.
Zfish   245 CHATGFMGARGRGTDELLGV-MDRVQIVNSTLGKALGGAAGGYTVGPKALIELLRQRSRPYLFSN 308

  Fly   336 SLPPMLTQAAISALDRFEREPQIFEQLQAKSKTLHQKFLRF-SKLTLRGDEVS----PVKHLYLA 395
            ||||.:...|..|::......:|.:.:.||:       :|| :.:|..|..:|    |:..:.|.
Zfish   309 SLPPPVVGCATRAVELLLASNEIAQSMAAKT-------MRFRNNMTQAGFTISGSAHPICPVMLG 366

  Fly   396 QPAENFDKELKLLTELADKCIARGVAVVQAAYLQNRERQPVRPS----IRIAVNRLLESSEIDNA 456
                    :.:|.:.:||..:..||.|:..:|       ||.|.    ||:.::......:||..
Zfish   367 --------DARLASLMADDMLKLGVYVIGFSY-------PVVPKGKARIRVQISAAHTDEDIDRT 416

  Fly   457 FE 458
            .:
Zfish   417 VD 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt-INP_610842.1 AAT_I 22..468 CDD:450240 108/392 (28%)
gcatNP_001166025.1 PRK06939 37..430 CDD:235893 108/392 (28%)

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