DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt-I and gcat

DIOPT Version :9

Sequence 1:NP_610842.1 Gene:Spt-I / 36448 FlyBaseID:FBgn0086532 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001166025.1 Gene:gcat / 402822 ZFINID:ZDB-GENE-060518-3 Length:431 Species:Danio rerio


Alignment Length:392 Identity:108/392 - (27%)
Similarity:183/392 - (46%) Gaps:45/392 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 RVVQSRVGKRIQVDGH--DCLNLGSHNYLGFLEDQEILEEACKSLRKYGVGSCGPRGFYGTMDVH 141
            ||:.|:.|..|.|||.  |.||..::||||.....|:::...::|:|||.|....|...||.|:|
Zfish    60 RVITSKQGPHICVDGSRGDILNFCANNYLGLSSHPEVVKAGVEALQKYGAGLSSVRFICGTQDIH 124

  Fly   142 LDLEDRIAKFMGLEEAIVYSYGFSTVASAIPAYAKRGDLIFVDEAVNFAIQKGLDASRSTIVFFK 206
            .:||:::|:|...|:.|:|:..|...|..........|.:..||..:.:|..|:...|:....:|
Zfish   125 KNLEEKLAQFHEREDCILYASCFDANAGLFEVLLGPDDAVLSDELNHASIIDGIRLCRAKRFRYK 189

  Fly   207 HNDVEDLERLLIEQEKRDQKNPKKAAKTRRFLVAEGIYMNTGEICPLPDLVALRQKYKLRLFIDE 271
            |.|:.|||..|.|.:          :...|.:|.:|::...|::.||..:..|.::|...:||||
Zfish   190 HMDLNDLEEKLKESQ----------SSRLRLVVTDGVFSMDGDVAPLKGICDLAEQYGAMVFIDE 244

  Fly   272 SISFGTLGQGGHGVTEHFNVDRDEVDLISAGMEGSM-ATVGGFCVGSHFIAEHQRLSGLGYIFSA 335
            ..:.|.:|..|.|..|...| .|.|.::::.:..:: ...||:.||...:.|..|.....|:||.
Zfish   245 CHATGFMGARGRGTDELLGV-MDRVQIVNSTLGKALGGAAGGYTVGPKALIELLRQRSRPYLFSN 308

  Fly   336 SLPPMLTQAAISALDRFEREPQIFEQLQAKSKTLHQKFLRF-SKLTLRGDEVS----PVKHLYLA 395
            ||||.:...|..|::......:|.:.:.||:       :|| :.:|..|..:|    |:..:.|.
Zfish   309 SLPPPVVGCATRAVELLLASNEIAQSMAAKT-------MRFRNNMTQAGFTISGSAHPICPVMLG 366

  Fly   396 QPAENFDKELKLLTELADKCIARGVAVVQAAYLQNRERQPVRPS----IRIAVNRLLESSEIDNA 456
                    :.:|.:.:||..:..||.|:..:|       ||.|.    ||:.::......:||..
Zfish   367 --------DARLASLMADDMLKLGVYVIGFSY-------PVVPKGKARIRVQISAAHTDEDIDRT 416

  Fly   457 FE 458
            .:
Zfish   417 VD 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt-INP_610842.1 AAT_I 22..468 CDD:302748 108/392 (28%)
BioF 79..463 CDD:223234 108/392 (28%)
gcatNP_001166025.1 PRK06939 37..430 CDD:235893 108/392 (28%)
BioF 40..420 CDD:223234 108/392 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0156
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312139at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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