DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt-I and Alas2

DIOPT Version :10

Sequence 1:NP_610842.1 Gene:Spt-I / 36448 FlyBaseID:FBgn0086532 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_038955432.1 Gene:Alas2 / 25748 RGDID:2084 Length:593 Species:Rattus norvegicus


Alignment Length:345 Identity:93/345 - (26%)
Similarity:161/345 - (46%) Gaps:37/345 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 VDGHDCLNLGSHNYLGFLEDQEILEEACKSLRKYGVGSCGPRGFYGTMDVHLDLEDRIAKFMGLE 155
            :|..|.....|::|||......:|:...::|:.:|.|:.|.|...||...|::||..:|:....:
  Rat   192 MDSKDVSVWCSNDYLGISRHPRVLQAIEETLKNHGAGAGGTRNISGTSKFHVELEQELAELHHKD 256

  Fly   156 EAIVYSYGF-------STVASAIPAYAKRGDLIFVDEAVNFAIQKGLDASRSTIVFFKHNDVEDL 213
            .|:::|..|       .|:|..:|     |..|:.|...:.::.:|:..|.:....|:|||...|
  Rat   257 SALLFSSCFVANDSTLFTLAKLLP-----GCEIYSDAGNHASMIQGIRNSGAVKFVFRHNDPGHL 316

  Fly   214 ERLLIEQEKRDQKNPKKAAKTRRFLVA-EGIYMNTGEICPLPDLVALRQKYKLRLFIDESISFGT 277
            ::||   ||.|.|.||        :|| |.::...|.||||.:|..:..:|....|:||..:.|.
  Rat   317 KKLL---EKSDPKTPK--------IVAFETVHSMDGAICPLEELCDVAHQYGALTFVDEVHAVGL 370

  Fly   278 LGQGGHGVTEHFNVDRDEVDLISAGMEGSMATVGGFCVGSHFIAEHQRLSGLGYIFSASLPPMLT 342
            .|..|.|:.|...: ..::|:||..:..:...|||:...:..:.:..|....|:||:.|||||:.
  Rat   371 YGTRGAGIGERDGI-MHKLDIISGTLGKAFGCVGGYIASTRDLVDMVRSYAAGFIFTTSLPPMVL 434

  Fly   343 QAAISALDRFEREPQIFEQLQAKSKTLHQKFLRFSKLTL--RGDEVSPVKHLYLAQPAENFDKEL 405
            ..|:.::...:.     |:.||..:. ||:.::..:..|  ||..|.|.....:.....|    .
  Rat   435 SGALESVRLLKG-----EEGQALRRA-HQRNVKHMRQLLMDRGFPVIPCPSHIIPIRVGN----A 489

  Fly   406 KLLTELADKCIARGVAVVQA 425
            .|.:::.|..:|:....|||
  Rat   490 ALNSKICDLLLAKHSIYVQA 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt-INP_610842.1 AAT_I 22..468 CDD:450240 93/345 (27%)
Alas2XP_038955432.1 Preseq_ALAS 5..100 CDD:462658
5aminolev_synth 149..554 CDD:273820 93/345 (27%)
Blue background indicates that the domain is not in the aligned region.

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