DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spt-I and hem1

DIOPT Version :10

Sequence 1:NP_610842.1 Gene:Spt-I / 36448 FlyBaseID:FBgn0086532 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_594388.1 Gene:hem1 / 2542028 PomBaseID:SPAC2F3.09 Length:558 Species:Schizosaccharomyces pombe


Alignment Length:337 Identity:90/337 - (26%)
Similarity:141/337 - (41%) Gaps:65/337 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 RRQLTKEEED----------RIIADYEPEPLVADTDPNHPLLHTRVVQSRVGKRIQV-DGHDCLN 98
            |.:|.|:..|          |:..:|   ||....|||              .|::| ..:|.||
pombe   139 REELDKKHRDKSYRYFNNINRLAKEY---PLAHLADPN--------------TRVEVWCSNDYLN 186

  Fly    99 LGSHNYLGFLEDQEILEEACKSLRKYGVGSCGPRGFYGTMDVHLDLEDRIAKFMGLEEAIVYSYG 163
            :|.|        ::|.|...:.:..||.|:.|.|...|.....:.||..:|.......|:|:...
pombe   187 MGGH--------KKIREAMHQCIETYGGGAGGTRNIAGHNQHAVRLEKSLADLHQKPAALVFGSC 243

  Fly   164 F-------STVASAIPAYAKRGDLIFVDEAVNFA-IQKGLDASRSTIVFFKHNDVEDLERLLIEQ 220
            :       ||:...:|      :.||:.:.:|.| :..|:..||...:.|||||:.|||..|   
pombe   244 YVANDATLSTLGRKLP------NCIFLSDEMNHASMINGIRNSRCEKIIFKHNDLVDLEAKL--- 299

  Fly   221 EKRDQKNPKKAAKTRRFLVAEGIYMNTGEICPLPDLVALRQKYKLRLFIDESISFGTLGQGGHGV 285
            .......||       .:..|.:|..:|.:.|:.::..|.:||....|:||..:.|..|..|.||
pombe   300 ASLPLNRPK-------IIAFESVYSMSGNVAPISEICDLAKKYGAITFLDEVHAVGMYGPRGAGV 357

  Fly   286 TEHFNVDRDEVDLISAGMEGSMATVGGFCVGSHFIAEHQRLSGLGYIFSASLPPMLTQAAISALD 350
            .|........||:|:..:..|...|||:...|..:.:..|....|:||:.||||.:...|::|::
pombe   358 AEETPGLLSRVDIITGTLAKSYGCVGGYIAASSTLVDMIRSLAPGFIFTTSLPPHVMVGALTAVE 422

  Fly   351 RF-----EREPQ 357
            ..     |||.|
pombe   423 HLKVSNVEREQQ 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt-INP_610842.1 AAT_I 22..468 CDD:450240 90/337 (27%)
hem1NP_594388.1 AAT_I 132..532 CDD:450240 90/337 (27%)

Return to query results.
Submit another query.