DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt-I and SPBC18E5.02c

DIOPT Version :9

Sequence 1:NP_610842.1 Gene:Spt-I / 36448 FlyBaseID:FBgn0086532 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_595848.1 Gene:SPBC18E5.02c / 2540820 PomBaseID:SPBC18E5.02c Length:509 Species:Schizosaccharomyces pombe


Alignment Length:476 Identity:191/476 - (40%)
Similarity:280/476 - (58%) Gaps:33/476 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IGSIFRNTP--TFALVLETLLLITVIWLLLHR---RGGGRRRQLTKEEEDRIIADYEPEPLVAD- 68
            |.|.::|.|  ||   :|.|||:...:.:|.:   .......:.|::|.:.::.|::||||||: 
pombe    39 IKSSYQNDPLRTF---IEFLLLVFAAYYVLRKPRTSPDNNYVEFTEKEINELVDDWKPEPLVAEL 100

  Fly    69 TD------PNHPL-----LHTRVVQSRVGKRIQVDGHDCLNLGSHNYLGFLEDQEILEEACKSLR 122
            ||      .:.|:     |||::          :||....|..|.|:|...|::.|.|.|..:||
pombe   101 TDVEKLELKSIPVLESVHLHTKL----------IDGRPITNFASFNFLDLAENKHITECAVATLR 155

  Fly   123 KYGVGSCGPRGFYGTMDVHLDLEDRIAKFMGLEEAIVYSYGFSTVASAIPAYAKRGDLIFVDEAV 187
            :.|:|:|||.|||||.|.||.||..||.|:|:|.||||:..|.|::|.|||::||||::.||||.
pombe   156 ECGLGACGPPGFYGTQDKHLRLEKDIASFIGVERAIVYAQSFQTISSVIPAFSKRGDILVVDEAC 220

  Fly   188 NFAIQKGLDASRSTIVFFKHNDVEDLERLLIEQEKRDQKNPKKAAKTRRFLVAEGIYMNTGEICP 252
            |||||||:..||:||.:||||:::||||:|  ||..|.........||||::.|||..|.|::..
pombe   221 NFAIQKGIQISRTTIRYFKHNNMKDLERIL--QELEDDFVKHNRPLTRRFIITEGISENYGDMVD 283

  Fly   253 LPDLVALRQKYKLRLFIDESISFGTLGQGGHGVTEHFNVDRDEVDLISAGMEGSMATVGGFCVGS 317
            |..:|||::|||.||.:||:.||||.|:.|.|:||||.|...:|::|...:..|:|..||||.||
pombe   284 LTKIVALKKKYKYRLILDETWSFGTCGRTGKGLTEHFGVPPTDVEIIIGSLTTSLAGGGGFCAGS 348

  Fly   318 HFIAEHQRLSGLGYIFSASLPPMLTQAAISALDRFERE-PQIFEQLQAKSKTLHQKFLRFSKLTL 381
            ..:.|||||||:.||:||:||..|..||..|:....|: ..:...|::||...|.|..|......
pombe   349 ELMVEHQRLSGMAYIYSAALPASLAVAAYEAISILSRDGGSMLNDLRSKSALFHAKLSRNKFFET 413

  Fly   382 RGDEVSPVKHLYLAQPAENFDKELKLLTELADKCIARGVAVVQAAYLQNRERQPVRPSIRIAVNR 446
            ..|..||:.||.......:.||::.||.|:.:.|||.|..:.:|..:::.||..|:||:||.::.
pombe   414 SSDIESPIIHLRFKDKDISHDKQVFLLEEIVELCIAEGFLIARAKRVESLERVKVQPSLRICIST 478

  Fly   447 LLESSEIDNAFEVIESVSSSV 467
            ...:.||:....:|:..:..|
pombe   479 GHSAEEIEKLALLIKEKTEIV 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt-INP_610842.1 AAT_I 22..468 CDD:302748 185/462 (40%)
BioF 79..463 CDD:223234 164/384 (43%)
SPBC18E5.02cNP_595848.1 AAT_I 51..493 CDD:302748 184/456 (40%)
BioF 108..494 CDD:223234 168/397 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 303 1.000 Domainoid score I254
eggNOG 1 0.900 - - E1_COG0156
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4681
Inparanoid 1 1.050 323 1.000 Inparanoid score I541
OMA 1 1.010 - - QHG54231
OrthoFinder 1 1.000 - - FOG0004733
OrthoInspector 1 1.000 - - oto100633
orthoMCL 1 0.900 - - OOG6_102559
Panther 1 1.100 - - LDO PTHR13693
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R651
SonicParanoid 1 1.000 - - X3331
TreeFam 1 0.960 - -
1413.860

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