DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt-I and Sptlc3

DIOPT Version :10

Sequence 1:NP_610842.1 Gene:Spt-I / 36448 FlyBaseID:FBgn0086532 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_780676.1 Gene:Sptlc3 / 228677 MGIID:2444678 Length:563 Species:Mus musculus


Alignment Length:460 Identity:129/460 - (28%)
Similarity:203/460 - (44%) Gaps:93/460 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 PEPL------VADTDPNHPLLHTRVVQSRVGKRIQVDGHDCLNLGSHNYLGFL-EDQEILEEACK 119
            |||.      |.| |.|....||       ||.|:    :.:|:.|:||||.. :..:.:.....
Mouse   134 PEPYMNVMEKVTD-DYNWTFRHT-------GKVIE----NIINMASYNYLGLAGKYDDSMVRVKD 186

  Fly   120 SLRKYGVGSCGPRGFYGTMDVHLDLEDRIAKFMGLEEAIVYSYGFSTVASAIPAYAKRGDLIFVD 184
            :|.|||||....|...||:|:|.:|||.:|:|:.:|..:.:..||:|.|..||.:..:|.||..|
Mouse   187 TLEKYGVGVASTRNEMGTLDIHKELEDLMAEFLNVEAVMSFGMGFATNAMNIPVFVGKGCLILSD 251

  Fly   185 EAVNFAIQKGLDASRSTIVFFKHNDVEDLERLLIEQEKRDQKNPKKAAKTRRFLVAEGIYMNTGE 249
            |..:.::..|...|.:.|..||||:.|:||:||.|...|.|....:|.| :..:|.||:|...|.
Mouse   252 EFNHTSVILGSRLSGAVIRPFKHNNAENLEKLLREAIIRGQPGTGRAWK-KILIVVEGVYSMEGS 315

  Fly   250 ICPLPDLVALRQKYKLRLFIDESISFGTLGQGGHGVTEHFNVDRDEVDLISAGMEGSMATVGGFC 314
            |..|..:|||::|||..|:|||:.|.|..|..|.||.|.|.:|.:::|:.......|.:..||:.
Mouse   316 IVNLAQIVALKKKYKAYLYIDEAHSIGCTGPTGRGVRELFGLDPEDIDVYMGTFTKSFSGSGGYI 380

  Fly   315 VGSHFIAEHQRLSGLGYIFSASLPPMLTQAAISAL----------DRFEREPQIFEQLQAKSKTL 369
            .|...|.::.|:......::.|:.|::....|.:|          ...||..|:.|.::     .
Mouse   381 GGKKEIVDYLRMQSHSTTYATSMSPVVAAQLIRSLKITMGYEGNIGGMERIQQLKENIK-----Y 440

  Fly   370 HQKFLRFSKLTLRGDEVSPVKHLYLAQPA------------------------------------ 398
            .::.|:.....:.|::.|||..:.|..||                                    
Mouse   441 FRRRLKEMGFIIYGNDFSPVIPVLLYMPAKVSAFSRFLLKKKISVVVVGFPATSLPEGRARFSMS 505

  Fly   399 -----ENFDKELKLLTELADKCIARGVAVVQAAYLQNRERQPVRPSIR-IAVNRLLESSEIDNAF 457
                 |..|..|:::.||.|              |.|.:..|::.|.| |..|:  |..:.:.:|
Mouse   506 SAHTREMLDTVLEVVDELGD--------------LLNVKYFPLKKSGRAILYNK--EGFDNEASF 554

  Fly   458 EVIES 462
            |.:.|
Mouse   555 EEMHS 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt-INP_610842.1 AAT_I 22..468 CDD:450240 129/460 (28%)
Sptlc3NP_780676.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
AAT_I 56..535 CDD:450240 121/432 (28%)
Blue background indicates that the domain is not in the aligned region.

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