DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt-I and T25B9.1

DIOPT Version :9

Sequence 1:NP_610842.1 Gene:Spt-I / 36448 FlyBaseID:FBgn0086532 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_501991.3 Gene:T25B9.1 / 177968 WormBaseID:WBGene00012007 Length:403 Species:Caenorhabditis elegans


Alignment Length:399 Identity:110/399 - (27%)
Similarity:180/399 - (45%) Gaps:41/399 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 RVVQSRVGKRIQVDGHD--CLNLGSHNYLGFLEDQEILEEACKSLRKYGVGSCGPRGFYGTMDVH 141
            ||:|.|.|..::|.|.|  .:|..::||||.....|::....|:|..:|.|....|...||.|:|
 Worm    33 RVIQGRQGVLVKVTGSDKPVINFCANNYLGLSSHPEVIAAGQKALETHGAGLSSVRFICGTQDIH 97

  Fly   142 LDLEDRIAKFMGLEEAIVYSYGFSTVASAIPAYAKRGDLIFVDEAVNFAIQKGLDASRSTIVFFK 206
            .:||.:||:|.|.|:.|:|:..|..............|.|..||..:.:|..|:..|::..:.:|
 Worm    98 KELEQKIAQFHGTEDTILYAACFDANGGIFEVMTGEQDSIISDELNHASIIDGIRLSKAKRLRYK 162

  Fly   207 HNDVEDLERLLIEQEKRDQKNPKKAAKTR-RFLVAEGIYMNTGEICPLPDLVALRQKYKLRLFID 270
            |.|:.|||..|           |:|..:| |.:|.:|::...|::.||.|:.:|.:||...||||
 Worm   163 HLDLGDLESKL-----------KEAEDSRFRLIVTDGVFSMDGDVAPLGDITSLAEKYNALLFID 216

  Fly   271 ESISFGTLGQGGHGVTEHFNVDRDEVD-LISAGMEGSMATVGGFCVGSHFIAEHQRLSGLGYIFS 334
            |..:.|..|:.|.|..|......|.:: .:...:.|||   ||:..|...:.:..|.....|:||
 Worm   217 ECHATGFFGKTGRGTAEAVGGRPDVINSTLGKALGGSM---GGYTTGPKPLIDLLRQRSRPYLFS 278

  Fly   335 ASLPPMLTQAAISALDRFEREPQIFEQLQAKSKTLH-QKFLRFSKLTLRG-DEVSPVKHLYLAQP 397
            .||.|.:..::|...|....:......||  :...| :|.:..:..|:.| |...|:..:.|.  
 Worm   279 NSLAPSIVGSSIKVFDLLMNDSSFIGSLQ--TNVSHFRKSMAANGFTILGNDPTHPICPVLLG-- 339

  Fly   398 AENFDKELKLLTELADKCIARGVAVVQAAYLQNRERQPVRPS----IRIAVNRLLESSEIDNAFE 458
                  :.||...:||:.:..|:.|:..::       ||.|.    ||:.::.......||...|
 Worm   340 ------DAKLAATMADELLKMGIYVIGFSF-------PVVPKGKARIRVQISAAHSKQHIDQLIE 391

  Fly   459 VIESVSSSV 467
            ...:|...:
 Worm   392 AFATVGKKL 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt-INP_610842.1 AAT_I 22..468 CDD:302748 110/399 (28%)
BioF 79..463 CDD:223234 109/393 (28%)
T25B9.1NP_501991.3 PRK06939 12..403 CDD:235893 110/399 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0156
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312139at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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