DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt-I and Alas1

DIOPT Version :9

Sequence 1:NP_610842.1 Gene:Spt-I / 36448 FlyBaseID:FBgn0086532 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001278764.1 Gene:Alas1 / 11655 MGIID:87989 Length:642 Species:Mus musculus


Alignment Length:376 Identity:100/376 - (26%)
Similarity:170/376 - (45%) Gaps:59/376 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 HTRVVQSRVGKRIQV-----DGHDCLNLG-------SHNYLGFLEDQEILEEACKSLRKYGVGSC 129
            ||..|...|.:|.|:     |..|.|...       |::|||......:.....::::::|.|:.
Mouse   216 HTYRVFKTVNRRAQIFPMADDYTDSLITKKQVSVWCSNDYLGMSRHPRVCGAVMETVKQHGAGAG 280

  Fly   130 GPRGFYGTMDVHLDLEDRIAKFMGLEEAIVYSYGFSTVASAIPAYAKR--GDLIFVDEAVNFAIQ 192
            |.|...||...|::||..:|...|.:.|:::|..|....|.:...||.  |..|:.|...:.::.
Mouse   281 GTRNISGTSKFHVELEQALADLHGKDAALLFSSCFVANDSTLFTLAKMMPGCEIYSDSGNHASMI 345

  Fly   193 KGLDASRSTIVFFKHNDVEDLERLLIEQEKRDQKNPKKAAKTRRFLVA-EGIYMNTGEICPLPDL 256
            :|:..||.....|:||||..|..||   ::.|...||        :|| |.::...|.:|||.:|
Mouse   346 QGIRNSRVPKYIFRHNDVNHLRELL---QRSDPSVPK--------IVAFETVHSMDGAVCPLEEL 399

  Fly   257 VALRQKYKLRLFIDESISFGTLGQGGHGVTEHFNVDRD----EVDLISAGMEGSMATVGGFCVGS 317
            ..:..::....|:||..:.|..|..|.|:.     |||    ::|:||..:..:...|||:...:
Mouse   400 CDVAHEFGAITFVDEVHAVGLYGARGGGIG-----DRDGVMPKMDIISGTLGKAFGCVGGYIAST 459

  Fly   318 HFIAEHQRLSGLGYIFSASLPPMLTQAAISALDRFEREPQIFEQLQAKS-KTLHQKFLRFSKLTL 381
            ..:.:..|....|:||:.||||||...|:.::       :|.:..:.:: :..||:.::..:..|
Mouse   460 SLLIDTVRSYAAGFIFTTSLPPMLLAGALESV-------RILKSSEGRALRRQHQRNVKLLRQML 517

  Fly   382 RGDEVSPVKH-------LYLAQPAENFDKELKLLTELADKCIARGVAVVQA 425
            . |...||.|       :.:|..|:|        ||:.|:.:.|....|||
Mouse   518 M-DAGLPVIHCPSHIIPVRVADAAKN--------TEICDELMTRHNIYVQA 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt-INP_610842.1 AAT_I 22..468 CDD:302748 100/376 (27%)
BioF 79..463 CDD:223234 98/374 (26%)
Alas1NP_001278764.1 Preseq_ALAS 2..140 CDD:286162
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..109
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..163
AAT_I 199..604 CDD:302748 100/376 (27%)
BioF 199..600 CDD:223234 100/376 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0156
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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