DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt-I and sptlc3

DIOPT Version :10

Sequence 1:NP_610842.1 Gene:Spt-I / 36448 FlyBaseID:FBgn0086532 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_002931785.2 Gene:sptlc3 / 100487030 XenbaseID:XB-GENE-5791607 Length:562 Species:Xenopus tropicalis


Alignment Length:424 Identity:132/424 - (31%)
Similarity:209/424 - (49%) Gaps:46/424 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FRNTPTFALVLETLLLITVIWLL-----LHRRGGGRRRQLTKEEEDR-----IIADYE------- 61
            |...|.:..|| |.:...|:.|.     ..|..|..:..:.:|.|::     :..|:|       
 Frog    65 FEEAPIYVAVL-TYIGYGVVTLFGYLRDFMRAWGLEKCHMAEEREEQKDFVPLYQDFENFYTRNL 128

  Fly    62 --------PEPLVADTDPNHPLLHTRVVQS------RVGKRIQVDGHDCLNLGSHNYLGFLE-DQ 111
                    ..|:.:...|...|:. |:...      ..||.|:    |.:|:||:|||||.| |.
 Frog   129 YMRVRDNWNRPICSVPGPQFDLME-RLTDDYNWTYRYTGKVIK----DVINMGSYNYLGFAENDP 188

  Fly   112 EILEEACKSLRKYGVGSCGPRGFYGTMDVHLDLEDRIAKFMGLEEAIVYSYGFSTVASAIPAYAK 176
            |.|......::.||||.|..|...|.:|.|.:|||.:|:|:|:|||:|:|.||:|.:..|||...
 Frog   189 ESLVSVKDVVQSYGVGVCSTRQEMGHLDNHKELEDLVAEFLGVEEAMVFSMGFATNSMNIPALVG 253

  Fly   177 RGDLIFVDEAVNFAIQKGLDASRSTIVFFKHNDVEDLERLLIEQEKRDQKNPKKAAKTRRFLVAE 241
            :|.||..||..:.::..|...|.:||..||||::::||:.|.:.....|....:|.| :..::.|
 Frog   254 KGCLILSDELNHTSLILGARLSGATIRIFKHNNMQNLEKQLRDAVVNGQPRTHRAWK-KILILVE 317

  Fly   242 GIYMNTGEICPLPDLVALRQKYKLRLFIDESISFGTLGQGGHGVTEHFNVDRDEVDLISAGMEGS 306
            |||...|.|..||::|||::|||..|::||:.|.|.:|..|.||.|:|.:|..::|::......|
 Frog   318 GIYSMEGSIARLPEIVALKKKYKAYLYLDEAHSIGAVGATGRGVVEYFGMDPTDIDVLMGTFTKS 382

  Fly   307 MATVGGFCVGSHFIAEHQRLSGLGYIFSASLPPMLTQ------AAISALDRFEREPQIFEQLQAK 365
            ....||:..|...:.::.|......:::||:||.:|:      ..|..||......:..:||:|.
 Frog   383 FGAAGGYIAGRKTLVDYLRTHSHSAVYAASMPPPITEQIIRVLKCIMGLDGTLIGLKRVQQLEAN 447

  Fly   366 SKTLHQKFLRFSKLTLRGDEVSPVKHLYLAQPAE 399
            ::...|| ||.......|:|.|||..:.|..|.:
 Frog   448 TRYFRQK-LRDVGFITYGNEDSPVIPVLLYMPGK 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt-INP_610842.1 AAT_I 22..468 CDD:450240 130/416 (31%)
sptlc3XP_002931785.2 AAT_I 67..559 CDD:450240 131/422 (31%)

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