DRSC/TRiP Functional Genomics Resources

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Protein Alignment GLaz and rbp4

DIOPT Version :10

Sequence 1:NP_523727.2 Gene:GLaz / 36447 FlyBaseID:FBgn0033799 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001015748.1 Gene:rbp4 / 548465 XenbaseID:XB-GENE-5841608 Length:199 Species:Xenopus tropicalis


Alignment Length:217 Identity:47/217 - (21%)
Similarity:73/217 - (33%) Gaps:77/217 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 AYGF-GRC--------PNYPSMPKFNMSRVLGHWYEVERS-----FYLPEIASGCTTFQFEPYNK 77
            |.|| |.|        ..:..|..||..|..|.||.|.:.     |.|..|.:   .|:::|.:|
 Frog    11 ALGFLGSCLADRDCRVDTFEVMKDFNKERYAGVWYAVAKKDPDGLFLLDNIVA---NFKYDPNDK 72

  Fly    78 GEQSKFSNFKLAVAIKNINRI----------------TGNPNVNIGYATPENSRSSIMDFKFTTR 126
                     |:....|...||                |.||                  .|:..:
 Frog    73 ---------KMTATAKGRVRILEKLELCANMVGTFIETKNP------------------AKYKMK 110

  Fly   127 FPDVIARLLPGSGKYQVLYTDYENFAILWSCGSIGSLGHSDQIW--ILGRDRDFEVDIRSKVYDV 189
            :...:|.|..|...:.::.|||..:||.::|......|..|..:  :..|.:|            
 Frog   111 YHGALAILERGLDDHWIVDTDYTTYAITYACRRRNFDGTCDDSYSFVFSRSKD------------ 163

  Fly   190 LKRLSLDPERLIISKNKQ-CPE 210
              .|.||.:|::..:.:| |.|
 Frog   164 --GLPLDAQRIVRKRQEQLCLE 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GLazNP_523727.2 lipocalin_FABP 30..204 CDD:471979 42/205 (20%)
rbp4NP_001015748.1 lipocalin_FABP 24..195 CDD:471979 42/204 (21%)

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