DRSC/TRiP Functional Genomics Resources

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Protein Alignment GLaz and lpr-4

DIOPT Version :9

Sequence 1:NP_001260936.1 Gene:GLaz / 36447 FlyBaseID:FBgn0033799 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_509852.2 Gene:lpr-4 / 181298 WormBaseID:WBGene00012257 Length:360 Species:Caenorhabditis elegans


Alignment Length:171 Identity:35/171 - (20%)
Similarity:63/171 - (36%) Gaps:51/171 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 YPSMPKFNMSRVLGHWYEVERSFYLPEIASGCTTFQFEPYNKGEQSKFSNFKLAVAIKNINRITG 100
            :|:....:.:|::|.|::|..|.::  |...||...|.....      :.:..:..|....| .|
 Worm   186 HPTAENVDTARMMGRWFQVINSPHV--IREACTVSHFGALTN------NTYSASFTILKFYR-EG 241

  Fly   101 NPNVNIGYATPENSRSSIMDFKFTTRFPDVIARLLPGSGKYQVLY----TDYENFAILWSCGSIG 161
            |||.:..||.....:|.                   .:|:: ||:    .|.|.|.::    .:|
 Worm   242 NPNGSPRYALGYGFKSG-------------------ETGQF-VLHNSNSADAEPFWVI----KMG 282

  Fly   162 SLGHSDQIWILGRDRDFEVD---IRSKVYDVLKRLSLDPER 199
            .|....|.       |:.:.   :|..|:.:.:    ||||
 Worm   283 PLNEYKQY-------DYAIVSTWVRYPVFVIAR----DPER 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GLazNP_001260936.1 Lipocalin 48..202 CDD:278490 33/159 (21%)
lpr-4NP_509852.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10612
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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