DRSC/TRiP Functional Genomics Resources

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Protein Alignment GLaz and rbp4l

DIOPT Version :10

Sequence 1:NP_523727.2 Gene:GLaz / 36447 FlyBaseID:FBgn0033799 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001090773.1 Gene:rbp4l / 100037859 XenbaseID:XB-GENE-5839942 Length:196 Species:Xenopus tropicalis


Alignment Length:207 Identity:45/207 - (21%)
Similarity:76/207 - (36%) Gaps:45/207 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VWLLSGVLLVTFAGTDAYGFGRC--PNYPSMPKFNMSRVLGHWYEVER----SFYLPEIASGCTT 69
            :.||..|||..:...:|..   |  .|.|.....::.|..|.||.:.:    ..:|.:..|...|
 Frog     5 IHLLLLVLLTIYEQCNAQS---CVVDNIPVKENLDLKRYAGKWYGIGKKDPEGLFLQDNISADYT 66

  Fly    70 FQFE----PYNKGEQSKFSNFKLAVAIKNINRITGNPNVNIGYATPENSRSSIMDFKFTTRFPDV 130
            .:.:    ..:|| :.|...|.|..|           .:...|..|:.|    :..|....:..:
 Frog    67 VEEDGTMIASSKG-RVKLFGFWLICA-----------EMAAQYTVPDPS----IPAKMYMTYQGL 115

  Fly   131 IARLLPGSGKYQVLYTDYENFAILWSCGSIGS----------------LGHSDQIWILGRDRDFE 179
            .:.|..|...|.|:.|||:|:||.::|.|:..                .|.|..|..:.|.:..|
 Frog   116 ASYLSSGGDNYWVIDTDYDNYAITYACRSLNGDGTCNDGYSIVFSRNPRGFSQAIMRIIRQKQEE 180

  Fly   180 VDIRSKVYDVLK 191
            :.:..:...||:
 Frog   181 ICMSGQFQSVLQ 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GLazNP_523727.2 lipocalin_FABP 30..204 CDD:471979 39/188 (21%)
rbp4lNP_001090773.1 lipocalin_FABP 24..196 CDD:471979 39/185 (21%)

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