DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrk and CCR4

DIOPT Version :9

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_199596.1 Gene:CCR4 / 834836 AraportID:AT5G47850 Length:751 Species:Arabidopsis thaliana


Alignment Length:638 Identity:131/638 - (20%)
Similarity:211/638 - (33%) Gaps:253/638 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 SRGHFRLPNCSSLPHYNASMRRPNCSYIGLTELKESEVSYDCRNGNGRFYMGTMNVSKSGI---- 238
            :..:|.||......|: .|:......:.|:.....:.:.:    ||..|        |||:    
plant   251 NNNNFSLPQTLKDIHF-TSIYAKGPMFCGVATRNYTLICW----GNENF--------KSGVFTPF 302

  Fly   239 -----------PCQRWDTQYPHKHFQPPLVFHQLLEGEN--YC---RNAGGEEPHPWCYTVDESV 287
                       ||:|   :.|::    ||...|.|.|..  .|   ||.|               
plant   303 QGLISQVVMPGPCRR---ECPYR----PLSGSQSLCGNELMICDLKRNDG--------------- 345

  Fly   288 RWQHCDIPMCPDYVDPNAVDLNTPIKMEKFFTPSMIFLLAGIGFVAIVTLHLMILLVYKLSKHKD 352
                       ::.|..|.:    .|.:.:...::.||:.|    .:.|..|::::.:.:.|   
plant   346 -----------EFPDTRAQN----SKNKTWSRRNIAFLVVG----CVGTFSLLLVISFLIFK--- 388

  Fly   353 YSQPAGAATAECSVSMRGGGDCGGNLNTSRE-----------TLGGNGNTNTLAKWGTIRSTATI 406
                   :...|.|      ...|.|:.:|.           ||...||...|.::..       
plant   389 -------SHCRCRV------HDSGRLDDTRTIDIPKLEKRLCTLASLGNPGQLMEFSI------- 433

  Fly   407 HSNCVALTTVTNVSDAKGTKPNARLEKLEYPRGDIVYVR-SLGQGAFGRVFQARAPGLVPDQEDL 470
              :.:||.|                        |...|| .||.|:||.|:|    |::.|... 
plant   434 --DELALAT------------------------DGFSVRFHLGIGSFGSVYQ----GVLSDGRH- 467

  Fly   471 LVAVKML------------------KDDASDQMQMDFEREACLLAEFDHPNIVRLLGVCALGRPM 517
             ||:|..                  ||.|       |..|...::..:|.|:|||||........
plant   468 -VAIKRAELTNPTLSGTTMRHRRADKDSA-------FVNELESMSRLNHKNLVRLLGFYEDTEER 524

  Fly   518 CLLFEYMAPGDLSEFLRACSPYATHQAPTQDRLQLNELHLLQMAANIAAGMLYLSE---RKFVHR 579
            .|::|||..|.|::.|        |. |..|.|....  .|.:|.:.|.|:.||.|   ...:||
plant   525 ILVYEYMKNGSLADHL--------HN-PQFDPLSWQT--RLMIALDAARGIQYLHEFIVPPVIHR 578

  Fly   580 DLATRNCLINEHMAVKIADFGLS---------------HKI----YLQ-DYYKGDENDFIPIRWM 624
            |:.:.|.|::.....|::|||||               |..    |:. :|||            
plant   579 DIKSSNILLDATWTAKVSDFGLSQMGPTEEDDVSHLSLHAAGTLGYIDPEYYK------------ 631

  Fly   625 PLESILYNKFSLESDVWAYGICLWEVFSFALQPYFGLTH---------------EEVIKYI---K 671
                  :.:.:.:|||:::|:.|.|:.|         .|               |.|:.||   :
plant   632 ------FQQLTTKSDVYSFGVVLLELLS---------GHKAIHNNEDENPRNLVEYVVPYILLDE 681

  Fly   672 EGNVLG--CPDNTPLSVYA------LMRRCWNRKPSERPGFAEINHCIQHSIA 716
            ...:|.  .|..||..:.|      |...|......:||...|:...::.::|
plant   682 AHRILDQRIPPPTPYEIEAVAHVGYLAAECLMPCSRKRPSMVEVVSKLESALA 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:295308 6/33 (18%)
KR 217..299 CDD:214527 19/101 (19%)
PTKc_Musk 435..713 CDD:133181 83/345 (24%)
Pkinase_Tyr 441..707 CDD:285015 81/333 (24%)
CCR4NP_199596.1 STKc_IRAK 449..730 CDD:270968 80/331 (24%)
TyrKc 449..729 CDD:197581 80/330 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 108 1.000 Inparanoid score I2087
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.