DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrk and AT4G29050

DIOPT Version :9

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_001328105.1 Gene:AT4G29050 / 829026 AraportID:AT4G29050 Length:683 Species:Arabidopsis thaliana


Alignment Length:581 Identity:124/581 - (21%)
Similarity:210/581 - (36%) Gaps:195/581 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 SRGHFRLPNCSSLPH----YNASMR---RPN--CSYIGLTELKESEVSYDCRNGNG--------- 224
            |:|..:|.|.|...:    ||:.:|   .||  .|....|.:.....:.:..:|:|         
plant    59 SKGLMKLTNSSEFSYGHVFYNSPVRFKNSPNGTVSSFSTTFVFAIVSNVNALDGHGLAFVISPTK 123

  Fly   225 -------RFYMGTMNVSKSGIPCQ-----RWDTQYPHKHFQPPLVFHQLLEGENYCRNAGGEEPH 277
                   ..|:|..|::.:|.|..     .:|| :.::.|                         
plant   124 GLPYSSSSQYLGLFNLTNNGDPSNHIVAVEFDT-FQNQEF------------------------- 162

  Fly   278 PWCYTVDESVRWQHCDIPMCPDYVDPN--AVDLNTPIKMEKFFTPSM----------IFLL---- 326
                                 |.:|.|  .:|:|: :..||..|...          |.|:    
plant   163 ---------------------DDMDNNHVGIDINS-LSSEKASTAGYYEDDDGTFKNIRLINQKP 205

  Fly   327 --AGIGF--------VAIVTLHL------MILLVYKLSKHKDYSQPAGAATAECSVSMRGGGDCG 375
              |.|.:        |.|..:||      ::.|...||.:...|...|..:|.            
plant   206 IQAWIEYDSSRRQLNVTIHPIHLPKPKIPLLSLTKDLSPYLFDSMYVGFTSAT------------ 258

  Fly   376 GNLNTSRETLGG----NGNTNTL-----------AKWGTIRSTATIHSNCVALT-----TVTNVS 420
            |.|.:|...||.    ||..:.:           ::..:::....|..:..:|.     |::.:.
plant   259 GRLRSSHYILGWTFKLNGTASNIDISRLPKLPRDSRSTSVKKILAISLSLTSLAILVFLTISYML 323

  Fly   421 DAKGTKPNARLEKLEYPRG-------DIVYVRS--------LGQGAFGRVFQARAPGLVPDQEDL 470
            ..|..|....||..|...|       |: |:.:        ||:|.||:|::...     ...::
plant   324 FLKRKKLMEVLEDWEVQFGPHRFAYKDL-YIATKGFRNSELLGKGGFGKVYKGTL-----STSNM 382

  Fly   471 LVAVKMLKDDASDQMQMDFEREACLLAEFDHPNIVRLLGVCALGRPMCLLFEYMAPGDLSEFLRA 535
            .:|||.:..|:...|: :|..|...:....|||:|||||.|.....:.|:::.|..|.|.:||  
plant   383 DIAVKKVSHDSRQGMR-EFVAEIATIGRLRHPNLVRLLGYCRRKGELYLVYDCMPKGSLDKFL-- 444

  Fly   536 CSPYATHQAPTQDRLQLNELHLLQMAANIAAGMLYLSE---RKFVHRDLATRNCLINEHMAVKIA 597
                 .|| |.|   .|:.....::..::|:|:.||..   :..:|||:...|.|:::.|..|:.
plant   445 -----YHQ-PEQ---SLDWSQRFKIIKDVASGLCYLHHQWVQVIIHRDIKPANVLLDDSMNGKLG 500

  Fly   598 DFGLSHKIYLQDYYKGDENDFIP--------IRWMPLESILYNKFSLESDVWAYGICLWEV 650
            ||||:         |..|:.|.|        ..::..|.....|.|..|||:|:||.:.|:
plant   501 DFGLA---------KLCEHGFDPQTSNVAGTFGYISPELSRTGKASTSSDVFAFGILMLEI 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:295308 12/42 (29%)
KR 217..299 CDD:214527 10/102 (10%)
PTKc_Musk 435..713 CDD:133181 66/242 (27%)
Pkinase_Tyr 441..707 CDD:285015 63/229 (28%)
AT4G29050NP_001328105.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 108 1.000 Inparanoid score I2087
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.