DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrk and AT4G28350

DIOPT Version :9

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_001320081.1 Gene:AT4G28350 / 828950 AraportID:AT4G28350 Length:681 Species:Arabidopsis thaliana


Alignment Length:216 Identity:57/216 - (26%)
Similarity:100/216 - (46%) Gaps:37/216 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   447 LGQGAFGRVFQARAPGLVPDQEDLLVAVK--MLKDDASDQMQMDFEREACLLAEFDHPNIVRLLG 509
            :|.|...:|::    |::..:|   ||||  |:....|.....:|..|...|....|.|||.|.|
plant   355 IGYGGNSKVYR----GVLEGKE---VAVKRIMMSPRESVGATSEFLAEVSSLGRLRHKNIVGLKG 412

  Fly   510 VCAL-GRPMCLLFEYMAPGDLSEFLRACSPYATHQAPTQDRLQLNELHLLQMAANIAAGMLYLS- 572
            .... |..:.|::|||..|.:.:.:..|:.            .||....:::..::|:|||||. 
plant   413 WSKKGGESLILIYEYMENGSVDKRIFDCNE------------MLNWEERMRVIRDLASGMLYLHE 465

  Fly   573 --ERKFVHRDLATRNCLINEHMAVKIADFGL------SHKIYLQDYYKGDENDFIPIRWMPLESI 629
              |.|.:|||:.:.|.|:::.|..::.||||      |.::....:..|...      :|..|.:
plant   466 GWETKVLHRDIKSSNVLLDKDMNARVGDFGLAKLQNTSKEMVSTTHVVGTAG------YMAPELV 524

  Fly   630 LYNKFSLESDVWAYGICLWEV 650
            ...:.|.::||:::|:.:.||
plant   525 KTGRASAQTDVYSFGVFVLEV 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:295308
KR 217..299 CDD:214527
PTKc_Musk 435..713 CDD:133181 57/216 (26%)
Pkinase_Tyr 441..707 CDD:285015 57/216 (26%)
AT4G28350NP_001320081.1 lectin_legume_LecRK_Arcelin_ConA 24..255 CDD:173887
STKc_IRAK 355..621 CDD:270968 57/216 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 108 1.000 Inparanoid score I2087
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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