DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrk and CRK18

DIOPT Version :9

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_001320043.1 Gene:CRK18 / 828425 AraportID:AT4G23260 Length:659 Species:Arabidopsis thaliana


Alignment Length:688 Identity:137/688 - (19%)
Similarity:237/688 - (34%) Gaps:240/688 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 TGLCREAAEKMLCAYAFPNCHMEGGRAVKAPLCFEDCQATHLQFCYNDWVLIEEKKERNMFIKSR 179
            ||:|...:|:.:|:                 ||......:.||.|.:        :....|....
plant    79 TGMCAPGSERDVCS-----------------LCIRSTSESLLQSCLD--------QADAFFWSGE 118

  Fly   180 GHFRLPNCSSLPHYNASMRRPNCSYIGLTELKESEVSYDCR-------------------NGNGR 225
            ....|...::.|.....:..|..:.....||..::..:|..                   |.:.:
plant   119 ETLCLVRY
ANRPFSGLLVMDPLGAIFNTGELNTNQTVFDIEWNNLTSSMIAGITSSSSGGNNSSK 183

  Fly   226 FYMG-----------------TMNVSKSGI-PCQRWDTQYPHKHFQPPLVFHQLLEGENYCR-NA 271
            :|..                 |.:||.... .|.|                ..:::.:|.|| :.
plant   184 YYSDDIALVPDFKNISALMQCTPDVSSEDCNTCLR----------------QNVVDYDNCCRGHQ 232

  Fly   272 GGEEPHPWCYTVDESVRWQ---------HCDIPMCPDYVDPNAVDLNTPI----KMEKFFTPSMI 323
            ||....|.|:     .||:         ..::|..|    |.:|...:||    |.:...:...|
plant   233 GGVMSRPNCF-----FRWEVYPFSGAIDQINLPKSP----PPSVTSPSPIANITKNDSRISGGKI 288

  Fly   324 FLLAGIGFVAIVTLHLMILLVYKLSKHKDYSQPAGAATAECSVSMRGGGDCGGNLNTSRETLGGN 388
               |.|..|.:||: ::::|.:.:|..:...|.....|......::                   
plant   289 ---AAIVVVTVVTI-ILVVLGFVISNRRKQKQEMDLPTESVQFDLK------------------- 330

  Fly   389 GNTNTLAKWGTIRSTATIHSNCVALTTVTNVSDAKGTKPNARLEKLEYPRGDIVYVRSLGQGAFG 453
                            ||.|      ..:|.|:.                      ..||:|.||
plant   331 ----------------TIES------ATSNFSER----------------------NKLGKGGFG 351

  Fly   454 RVFQARAPGLVPDQEDLLVAVKMLKDDASDQMQMDFEREACLLAEFDHPNIVRLLGVCALGRPMC 518
            .|::    |::.:..:  :|||.| ...|.|.:::|:.|..::|:..|.|:|||||....|....
plant   352 EVYK----GMLMNGTE--IAVKRL-SKTSGQGEVEFKNEVVVVAKLQHINLVRLLGFSLQGEEKL 409

  Fly   519 LLFEYMAPGDLSEFLRACSPYATHQAPTQDRLQLNELHLLQMAANIAAGMLYL---SERKFVHRD 580
            |::|:::...|..||         ..||: |.||:......:...|..|:|||   |..|.:|||
plant   410 LVYEFVSNKSLDYFL---------FDPTK-RNQLDWTMRRNIIGGITRGILYLHQDSRLKIIHRD 464

  Fly   581 LATRNCLINEHMAVKIADFGLSHKIYLQDYYKGDENDFI-PIRWMPLESILYNKFSLESDVWAYG 644
            |...|.|::..|..||||||:: :|:..|....:....: ...:|..|.:.:.:||::|||:::|
plant   465 LKASNILLDADMNPKIADFGMA-RIFGVDQTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFG 528

  Fly   645 ICLWEVFS-------------------------------FALQPYFG--LTHEEVIKYIKEGNVL 676
            :.:.|:.|                               ..|.|:..  .|.||||:||..|.: 
plant   529 VLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKSLHELLDPFINQDFTSEEVIRYIHIGLL- 592

  Fly   677 GCPDNTPLSVYALMRRCWNRKPSERPGFAEINHCIQHS 714
                            |....|::||..:.|:..:.:|
plant   593 ----------------CVQENPADRPTMSTIHQMLTNS 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:295308 16/96 (17%)
KR 217..299 CDD:214527 18/128 (14%)
PTKc_Musk 435..713 CDD:133181 81/314 (26%)
Pkinase_Tyr 441..707 CDD:285015 80/302 (26%)
CRK18NP_001320043.1 Stress-antifung 29..126 CDD:279926 12/71 (17%)
Stress-antifung 150..246 CDD:279926 16/116 (14%)
TyrKc 344..611 CDD:197581 81/301 (27%)
STKc_IRAK 345..613 CDD:270968 81/302 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 108 1.000 Inparanoid score I2087
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.