DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrk and CRK11

DIOPT Version :9

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_194050.2 Gene:CRK11 / 828418 AraportID:AT4G23190 Length:667 Species:Arabidopsis thaliana


Alignment Length:557 Identity:124/557 - (22%)
Similarity:205/557 - (36%) Gaps:167/557 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 SSLPHYNA--SMRRPNCSYIGLTELKESEVSYDCRNGNGRFYMGTMNVSKSGIPCQRWDTQYPHK 250
            ||..||:|  ::..|..:...|.:......|.||.|                  |.|        
plant   178 SSDNHYSADSAVLTPLLNIYALMQCTPDLSSGDCEN------------------CLR-------- 216

  Fly   251 HFQPPLVFHQLLEGENYC-RNAGGEEPHPWCYTVDESVRWQHCDI----------------PMCP 298
                    ...::.::.| :..||....|.|:     :||   |:                |..|
plant   217 --------QSAIDYQSCCSQKRGGVVMRPSCF-----LRW---DLYTYSNAFDNLTVASPPPEPP 265

  Fly   299 DYVDPNAVDLNTPIKME-KFFTPSMIFLLAGIGFVAIVTLHLMILLVYKLSKHKDYSQPAGAATA 362
            ..|...|.|.:.|...: |..:..::..:.....:||:.|.::..::::  :.|.|.:....:.:
plant   266 VTVPQPAGDQDNPTNNDSKGISAGVVVAITVPTVIAILILLVLGFVLFR--RRKSYQRTKTESES 328

  Fly   363 ECSVSMRGGGDCGGNLNTSRETLGGNGNTNTLAKWGTIRSTATIHSNCVALTTVTNVSDAKGTKP 427
            :.|                                                ||.:.|.|.|    
plant   329 DIS------------------------------------------------TTDSLVYDFK---- 341

  Fly   428 NARLEKLEYPRGDIVYVRSLGQGAFGRVFQARAPGLVPDQEDLLVAVKMLKDDASDQMQMDFERE 492
                 .:|...........||:|.||.|::    |.:.:..|  ||||.| ...|.|...:|..|
plant   342 -----TIEAATNKFSTSNKLGEGGFGAVYK----GKLSNGTD--VAVKRL-SKKSGQGTREFRNE 394

  Fly   493 ACLLAEFDHPNIVRLLGVCALGRPMCLLFEYMAPGDLSEFLRACSPYATHQAPTQDRLQLNELHL 557
            |.|:.:..|.|:|||||.|.......|::|::....|..||          ...:.:.||:....
plant   395 AVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFL----------FDPEKQSQLDWTRR 449

  Fly   558 LQMAANIAAGMLYL---SERKFVHRDLATRNCLINEHMAVKIADFGLSHKIYLQDYYKGDENDFI 619
            .::...||.|:|||   |..|.:||||...|.|::..|..|||||||: .|:..:..:|:.|...
plant   450 YKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLA-TIFGVEQTQGNTNRIA 513

  Fly   620 -PIRWMPLESILYNKFSLESDVWAYGICLWEVFSFALQPYFGLTHEEVIKYIKEGNVLGCPDNTP 683
             ...:|..|..::.::|::||::::|:.:.|:.|       |..:..|.: :.|.:..|     .
plant   514 GTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIIS-------GKKNSGVYQ-MDETSTAG-----N 565

  Fly   684 LSVYALMRRCW-NRKPSE--RPGFA------EINHCI 711
            |..||  .|.| |:.|.|  .|.|.      |:..||
plant   566 LVTYA--SRLWRNKSPLELVDPTFGRNYQSNEVTRCI 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:295308 7/25 (28%)
KR 217..299 CDD:214527 14/98 (14%)
PTKc_Musk 435..713 CDD:133181 85/290 (29%)
Pkinase_Tyr 441..707 CDD:285015 81/278 (29%)
CRK11NP_194050.2 Stress-antifung 26..125 CDD:279926
Stress-antifung <168..244 CDD:279926 20/107 (19%)
TyrKc 355..624 CDD:197581 84/279 (30%)
STKc_IRAK 356..625 CDD:270968 84/278 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 108 1.000 Inparanoid score I2087
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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