DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrk and AT3G45330

DIOPT Version :9

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_190119.1 Gene:AT3G45330 / 823671 AraportID:AT3G45330 Length:682 Species:Arabidopsis thaliana


Alignment Length:684 Identity:136/684 - (19%)
Similarity:231/684 - (33%) Gaps:207/684 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 LCFED----CQATHLQFCYNDWVLIEEKKERNMFIKSRGHF------RLPNCSSLPHYNASMRRP 200
            :||.:    .....|.|.||.:    .:.:.|:.:.....|      :|.|.::....:|...||
plant    14 ICFVNLISFSSQQDLSFIYNGF----NQDQTNLNLDGSAKFLQDGLLQLTNATTQQKGHAFFNRP 74

  Fly   201 -----------------NCSYI---------GLTELKESEVSYDCRNGNGRFYMGTMNVSKSGIP 239
                             .|:.:         |:..:..|  |.|....:...|:|..|:|.:|.|
plant    75 FEFGSASSQSPSFSTHFVCALVPKPGVDGGHGIAFVLSS--SMDLTQADPTQYLGLFNISTNGSP 137

  Fly   240 CQ-----RWDTQYPHKHFQPPLVFHQLLEGENYCRNAGGEEPHPWCYTVDESVRWQHCD------ 293
            ..     ..||.             |..|.::..:|..|.:.:. ..:|:.:....:.|      
plant   138 SSHLLAIELDTV-------------QSAEFDDRDKNHVGIDENS-LQSVESASASYYSDKEGKNK 188

  Fly   294 ---------IPMCPDYVDPNAVDLNTPIKMEKFFTPSMIFLLAGIGFVAIVTLHLMILLVYKLSK 349
                     |.:..||.|........|:|.:|   ||...|...|...||               
plant   189 SLKLLSGDPIQVWIDYEDTLLNVTLAPLKTQK---PSKPLLSITINLTAI--------------- 235

  Fly   350 HKDYSQPAGAATAECSVSMRGGGDCGGNLNTSRETLGGNGNTNTLAKWGTIRSTATIHSNCVA-L 413
            ..|.....|.:.|.            |:|.:.:..||          |...|:.|.:.|..:: |
plant   236 FPDRKAFIGFSAAT------------GSLISYQYILG----------WSFSRNRALLQSLDISKL 278

  Fly   414 TTVTNVSDAKGTKP-----------------------------NARLEKLEYPRGDIVYVRS--- 446
            .||......:.|.|                             ..| |..|.|.|.:.|...   
plant   279 PTVPRPKKPEKTSPLLIVLLIILAIIVMVVVGGFYLYRRKKYAEVR-EPWEKPYGPLRYSYKSLY 342

  Fly   447 -----------LGQGAFGRVFQARAPGLVPDQEDLLVAVKMLKDDASDQMQMDFEREACLLAEFD 500
                       ||:|.||.|::    |.:|...|  :|||.|..||...|: .|..|...:....
plant   343 KATRGFNKDGRLGRGGFGEVYK----GTLPILGD--IAVKRLSHDAEQGMK-QFVAEVVTMGSLQ 400

  Fly   501 HPNIVRLLGVCALGRPMCLLFEYMAPGDLSEFLRACSPYATHQAPTQDRLQLNELHLLQMAANIA 565
            |.|:|.|||.|.....:.|:.:||..|.:.::|       .|    .|:..|:....:.:..:||
plant   401 HKNLVPLLGYCRRKGELLLVSKYMEGGSVDQYL-------FH----GDKPPLSWSQRVSILRDIA 454

  Fly   566 AGMLYL---SERKFVHRDLATRNCLINEHMAVKIADFGLSHKIYLQDYYKGDENDFI----PIRW 623
            :.:.||   :.:..:|||:...|.::|.::...:.|||::.   ..|:  |......    .|.:
plant   455 SALCYLHTGASQVVLHRDIKASNVMLNGNLQGFLGDFGMAR---FDDH--GSNLSATAAVGTIGY 514

  Fly   624 MPLESILYNKFSLESDVWAYGICLWEVF--SFALQPYFGLTHEEVIKYI----KEGNVLGCPDN- 681
            |.|| :.....|..:||:|:|..:.||.  .....|...:....::|::    :||:::...|. 
plant   515 MALE-LTSTGTSTRTDVYAFGAFMLEVTCGRRPFDPAMPVEKRHLVKWVCECWREGSLVNAVDTR 578

  Fly   682 -----TPLSVYALMR---RCWNRKPSERPGFAEI 707
                 .|..|..:::   .|.:..|..||...::
plant   579 LRGKFVPGEVEMVLKLGLLCTSIIPEARPNMEQV 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:295308 15/101 (15%)
KR 217..299 CDD:214527 16/101 (16%)
PTKc_Musk 435..713 CDD:133181 73/309 (24%)
Pkinase_Tyr 441..707 CDD:285015 70/301 (23%)
AT3G45330NP_190119.1 Lectin_legB 27..279 CDD:278564 54/311 (17%)
PKc_like 354..618 CDD:304357 69/283 (24%)
TyrKc 354..616 CDD:197581 69/283 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 108 1.000 Inparanoid score I2087
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.