DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrk and AT3G08870

DIOPT Version :9

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_001327766.1 Gene:AT3G08870 / 820035 AraportID:AT3G08870 Length:714 Species:Arabidopsis thaliana


Alignment Length:575 Identity:126/575 - (21%)
Similarity:216/575 - (37%) Gaps:186/575 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 RRPNCSYIGL------TELKESEVSYDCRNGNGRFYMGTMNVSKSGIPCQ---RWD--------T 245
            ||.|  :|||      :.::|..:.||..:....|.:      :||.|.:   .:|        |
plant   190 RRGN--HIGLNFNNLSSNVQEPLIYYDTEDRKEDFQL------ESGEPIRVLIDYDGSSETLNVT 246

  Fly   246 QYPHK-HFQP--PLV------FHQLLEGENYC--RNAGGEEPHPWCYTVDESVRWQHC-DIPMCP 298
            .||.: .|:|  ||:      ..::::.|.|.  ..|.|::.....|.:..|  :..| :.||. 
plant   247 IYPTRLEFKPKKPLISRRVSELSEIVKDEMYVGFTAATGKDQSSAHYVMGWS--FSSCGENPMA- 308

  Fly   299 DYVDPNAVDLNTPIKMEKFFTPSMIFLLAGIGFVAIVTLHLMILL-VYKLSKHKDYSQPAGAATA 362
            |:::.:.:.....:..:|.:...:|.|:..:   :||||.|::|| ::.:.|.:...:       
plant   309 DWLEISRLPPPPRLSNKKGYNSQVIVLIVAL---SIVTLVLLVLLFIFVMYKRRIQEE------- 363

  Fly   363 ECSVSMRGGGDCGGNLNTSRETLGGNGNTNTLAKWGTIRSTATIHSNCVALTTVTNVSDAKGTKP 427
                                         :||..|                              
plant   364 -----------------------------DTLEDW------------------------------ 369

  Fly   428 NARLEKLEYP---RGDIVYVRS--------LGQGAFGRVFQARAPGLVPDQEDLLVAVKMLKDDA 481
                 :::||   |...:|:.:        :|.|.||.|::.......|      :|||.:   .
plant   370 -----EIDYPHRFRYRDLYLATKKFKESEIIGTGGFGIVYRGNLSSSGP------IAVKKI---T 420

  Fly   482 SDQMQ--MDFEREACLLAEFDHPNIVRLLGVCALGRPMCLLFEYMAPGDLSEFLRACSPYATHQA 544
            |:.:|  .:|..|...|....|.|:|.|.|.|.....:.|:::|:..|.|...|        :|.
plant   421 SNSLQGVREFMAEIESLGRLGHKNLVNLQGWCKHKNELLLIYDYIPNGSLDSLL--------YQT 477

  Fly   545 PTQDRLQLNELHLLQMAANIAAGMLYLS---ERKFVHRDLATRNCLINEHMAVKIADFGLSHKIY 606
            |.::.:.|......::...||:|:|||.   |:..||||:...|.||:|.|..|:.||||:..  
plant   478 PRRNGIVLPWDVRFEIIKGIASGLLYLHEEWEQIVVHRDVKPSNVLIDEDMNAKLGDFGLARL-- 540

  Fly   607 LQDYYKGDENDFIPI----RWMPLESILYNKFSLESDVWAYGICLWEVF---------SFALQPY 658
               |.:|.......|    .:|..|.....|.|..|||:|:|:.|.|:.         :|.|..:
plant   541 ---YERGTLTQTTKIVGTLGYMAPELTRNGKGSTASDVFAFGVLLLEIVCGNKPTNAENFFLADW 602

  Fly   659 FGLTHEEVIKYIKEGNVLGCPDNTPLS-----------VYALMRRCWNRKPSERP 702
                   |:::...|.:|...|....|           |..|:  |.::||..||
plant   603 -------VMEFHTNGGILCVVDQNLGSSFNGREAKLALVVGLL--CCHQKPKFRP 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:295308 6/19 (32%)
KR 217..299 CDD:214527 23/104 (22%)
PTKc_Musk 435..713 CDD:133181 81/308 (26%)
Pkinase_Tyr 441..707 CDD:285015 78/299 (26%)
AT3G08870NP_001327766.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 108 1.000 Inparanoid score I2087
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.