DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrk and Cad96Ca

DIOPT Version :9

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster


Alignment Length:636 Identity:165/636 - (25%)
Similarity:248/636 - (38%) Gaps:184/636 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 NASMRRPNCSYIGLTELKESEVSYDCRNGNGRF--YMGTMNVSKSGIPCQR---WDTQYPHKH-F 252
            |:|..||..|.        |.|.::......||  ..|..:: ::|:|..|   |....|..: |
  Fly   164 N
SSGYRPQTSI--------SNVVHNISQFLPRFDQLPGVQSI-RNGLPNSRPGGWYPPVPQNNIF 219

  Fly   253 QPPLVFHQLLEGENY----------CRNAGGEEPHPWCYTVDESVRWQHCDIPMCPDYVD---PN 304
            .||..      |.||          .....|||..|     ||.|      .|..|..:.   |.
  Fly   220 GPPPF------GNNYPPPPPNIPGVRGEQSGEEEQP-----DEEV------TPTTPVRISSTTPK 267

  Fly   305 AVDLNTPI------KMEKFF-----TPS-----------MIFLLAGIGFVAIVT------LHLMI 341
            :....|||      ::|...     |||           .||.|.. |.:.||.      :.:.:
  Fly   268 SRTKLTPITANNSTRVESAIPAETTTPSGGHHNNSSSPITIFSLKS-GTIPIVVTVGGFFVAIAV 331

  Fly   342 LLVY-------------KLSKHK------------------------------------------ 351
            ||.|             |.:|.|                                          
  Fly   332 LLAYLCRRRLCAISRTLKKTKEKEELAKKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPW 396

  Fly   352 DYSQPAGAATAECSVSMRGG------------GDCGGNLNTSRETLGGNGNTNTLAKWGTIRSTA 404
            :..|..|.||::.|..:..|            |:.|.||.....| ||.|::      |...:..
  Fly   397 ERDQQMGIATSQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLT-GGAGSS------GAPENAF 454

  Fly   405 TIHSNCVALTTVTNVSDAKGTKPNARLEKLEYPRGDIVYVRSLGQGAFGRVFQARAPGLVPDQED 469
            ...:||                     ::.|:||..:.:...||:||||:|::..|..:..::..
  Fly   455 AGEANC---------------------DRWEFPRYRLKFFNILGEGAFGQVWRCEATNINGNEGI 498

  Fly   470 LLVAVKMLKDDASDQMQMDFEREACLLAEFD-------HPNIVRLLGVCALGRPMCLLFEYMAPG 527
            ..||||.||:.|::..:.|      ||:|.:       |.|:|.|||.|....|..::.||:..|
  Fly   499 TTVAVKTLKESATEVDRKD------LLSELEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVNRG 557

  Fly   528 DLSEFLRACSPYATHQAPTQDRLQ-LNELHLLQMAANIAAGMLYLSERKFVHRDLATRNCLINEH 591
            .|..:||: |....|...|..:.. |....|......:|.||.||:.|..:|||||.||.||.:.
  Fly   558 KLQTYLRS-SRAERHYGNTHGKSNVLTSCDLTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDD 621

  Fly   592 MAVKIADFGLSHKIYLQDYYKGDENDFIPIRWMPLESILYNKFSLESDVWAYGICLWEVFSFALQ 656
            ...|:||||.:..:.....|:......:|||||..||:..|.||::||:|::||.:||:.:....
  Fly   622 HTCKVADFGFARDVITSKIYERKSEGKLPIRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGST 686

  Fly   657 PYFGLTHEEVIKYIKEGNVLGCPDNTPLSVYALMRRCWNRKPSERPGFAEI 707
            ||.|::..:|::.:::|..|..|::....:|.:|..||:..|.|||.||||
  Fly   687 PYPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLFAEI 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:295308 5/17 (29%)
KR 217..299 CDD:214527 22/97 (23%)
PTKc_Musk 435..713 CDD:133181 98/281 (35%)
Pkinase_Tyr 441..707 CDD:285015 93/273 (34%)
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 165/636 (26%)
STYKc 470..741 CDD:214568 95/275 (35%)
PTKc 474..742 CDD:270623 95/271 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455357
Domainoid 1 1.000 165 1.000 Domainoid score I1208
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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