DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrk and Cad96Ca

DIOPT Version :10

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster


Alignment Length:636 Identity:165/636 - (25%)
Similarity:248/636 - (38%) Gaps:184/636 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 NASMRRPNCSYIGLTELKESEVSYDCRNGNGRF--YMGTMNVSKSGIPCQR---WDTQYPHKH-F 252
            |:|..||..|.        |.|.::......||  ..|..:: ::|:|..|   |....|..: |
  Fly   164 N
SSGYRPQTSI--------SNVVHNISQFLPRFDQLPGVQSI-RNGLPNSRPGGWYPPVPQNNIF 219

  Fly   253 QPPLVFHQLLEGENY----------CRNAGGEEPHPWCYTVDESVRWQHCDIPMCPDYVD---PN 304
            .||..      |.||          .....|||..|     ||.|      .|..|..:.   |.
  Fly   220 GPPPF------GNNYPPPPPNIPGVRGEQSGEEEQP-----DEEV------TPTTPVRISSTTPK 267

  Fly   305 AVDLNTPI------KMEKFF-----TPS-----------MIFLLAGIGFVAIVT------LHLMI 341
            :....|||      ::|...     |||           .||.|.. |.:.||.      :.:.:
  Fly   268 SRTKLTPITANNSTRVESAIPAETTTPSGGHHNNSSSPITIFSLKS-GTIPIVVTVGGFFVAIAV 331

  Fly   342 LLVY-------------KLSKHK------------------------------------------ 351
            ||.|             |.:|.|                                          
  Fly   332 LLAYLCRRRLCAISRTLKKTKEKEELAKKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPW 396

  Fly   352 DYSQPAGAATAECSVSMRGG------------GDCGGNLNTSRETLGGNGNTNTLAKWGTIRSTA 404
            :..|..|.||::.|..:..|            |:.|.||.....| ||.|::      |...:..
  Fly   397 ERDQQMGIATSQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLT-GGAGSS------GAPENAF 454

  Fly   405 TIHSNCVALTTVTNVSDAKGTKPNARLEKLEYPRGDIVYVRSLGQGAFGRVFQARAPGLVPDQED 469
            ...:||                     ::.|:||..:.:...||:||||:|::..|..:..::..
  Fly   455 AGEANC---------------------DRWEFPRYRLKFFNILGEGAFGQVWRCEATNINGNEGI 498

  Fly   470 LLVAVKMLKDDASDQMQMDFEREACLLAEFD-------HPNIVRLLGVCALGRPMCLLFEYMAPG 527
            ..||||.||:.|::..:.|      ||:|.:       |.|:|.|||.|....|..::.||:..|
  Fly   499 TTVAVKTLKESATEVDRKD------LLSELEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVNRG 557

  Fly   528 DLSEFLRACSPYATHQAPTQDRLQ-LNELHLLQMAANIAAGMLYLSERKFVHRDLATRNCLINEH 591
            .|..:||: |....|...|..:.. |....|......:|.||.||:.|..:|||||.||.||.:.
  Fly   558 KLQTYLRS-SRAERHYGNTHGKSNVLTSCDLTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDD 621

  Fly   592 MAVKIADFGLSHKIYLQDYYKGDENDFIPIRWMPLESILYNKFSLESDVWAYGICLWEVFSFALQ 656
            ...|:||||.:..:.....|:......:|||||..||:..|.||::||:|::||.:||:.:....
  Fly   622 HTCKVADFGFARDVITSKIYERKSEGKLPIRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGST 686

  Fly   657 PYFGLTHEEVIKYIKEGNVLGCPDNTPLSVYALMRRCWNRKPSERPGFAEI 707
            ||.|::..:|::.:::|..|..|::....:|.:|..||:..|.|||.||||
  Fly   687 PYPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLFAEI 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:470581 5/17 (29%)
KR 217..299 CDD:214527 22/97 (23%)
PTKc_Musk 435..713 CDD:133181 98/281 (35%)
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 165/636 (26%)
PTKc 474..742 CDD:270623 95/271 (35%)

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