DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrk and Sdr

DIOPT Version :9

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_001287331.1 Gene:Sdr / 41809 FlyBaseID:FBgn0038279 Length:868 Species:Drosophila melanogaster


Alignment Length:814 Identity:145/814 - (17%)
Similarity:247/814 - (30%) Gaps:251/814 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RVLRG---------MVLKWGANLAVLGLCVFLFASA----THANSLNAIEEPV---------TRR 54
            |::||         :|:....||..|||...|...:    ..:|.|....|.|         ||:
  Fly   115 RIIRGQELLFDQYSLVVYENRNLRELGLVELLRIQSGFIRVESNPLLCFVETVDWIYLMGNATRQ 179

  Fly    55 HHQRHHEREREENGYCAPY---------SGKVCKEYLTGQ------------VWYSLE--DPTGG 96
            |....|.|.:.:...|...         |.:.|....|.|            :...|.  |..|.
  Fly   180 HFSLKHNRPQSQCPLCGSLSADFEFIRNSSERCWNVNTTQLRPQPPRLKDCPIACGLNGCDSAGK 244

  Fly    97 WKNEQVTTALWDELISDLTGLCREAAEKMLC------AYAF--PNC--HMEGGRAVKAPL----- 146
            ..:....|..:.:..|    ||.....:|.|      :|..  ..|  |.|.....:.||     
  Fly   245 CCDHNCVTGCYSQNCS----LCANYQGRMGCVNQCVASYELNKRRCIGHRECRELGRIPLIRGYQ 305

  Fly   147 CFEDCQATHLQFCYNDWVLIEEKKERNMFIKSRGHFRLPNCSSLPHYNASMRRPNCSYIGLTELK 211
            |.:.|..       |...::..|...:..::..|.|.:.:.:.|                     
  Fly   306 CVKKCPG-------NQKEILVAKGIIHCQVECNGDFHVKSAADL--------------------- 342

  Fly   212 ESEVSYDCRNGNGRFYMGTMNVS-------KSGIPCQRWDTQY---PHKHFQPPLVFHQLLE--- 263
              ||..||...||...:...|:.       ::.:...:..|.|   .|......|.|.|.|:   
  Fly   343 --EVLQDCVTINGSLTIELTNIKEKIVDALENALASVKEITGYLKVIHSAQLMSLTFLQNLDAIR 405

  Fly   264 GENYCRNAGGEEPHPWCYTVDESVRWQHCDIPMCPDYVDPNAVDLNTPIKMEKFFTPS-MIFLLA 327
            |:....|.         |.:                ||..|       ..:|..:.|: ::.:..
  Fly   406 GDKLVENK---------YAL----------------YVVNN-------YHLEHIWPPNHLVIIQR 438

  Fly   328 GIGFVAIVTLHLMILLVYKLSKHKDYSQPAGAATAECSVSMRGGGD---CGG---NLNTSRETLG 386
            |..|     .||...|.|:.......|..:|...:...||....|:   ||.   :||...|.| 
  Fly   439 GTLF-----FHLNPRLCYEKIHQLQGSLKSGENISVADVSPNSNGERVICGDAVRSLNPKVEDL- 497

  Fly   387 GNGNTNTLAKWGTIRSTATIHSNCVALTTVTNVSDAKGTKPNARLEKL-----EYPRGDIVYVRS 446
                                  |..|:..:.:..|.:|      :|.|     .|....:..| :
  Fly   498 ----------------------NSTAVRIILDYMDWEG------METLIGYSYHYKEAPVQNV-T 533

  Fly   447 LGQGAFGRVFQARAPGLVPDQEDLLVA------------VKMLKDDASDQMQMD-FEREACLLAE 498
            :..|..|.........:||:|....|.            ||.| ......:|:| :.:.......
  Fly   534 MYDGRHGCGHDNWLMDVVPNQSRRHVISGLKPYTQYAYFVKTL-TRTEYHIQIDAYSKIGYFQTL 597

  Fly   499 FDHPN-IVRLLGVCALGRPMCLLFEYMAP----GDLSEFLRACSPY-ATHQAPTQDRLQLNELHL 557
            .|.|: ::|:.|...:...  :|..:..|    |.:..:......| ||.:|..::.:.:.    
  Fly   598 PDRPSPVLRIYGSSEISSQ--ILLHWWPPRRPNGVIKNYFVTAEKYNATKEAKDKNYVNVE---- 656

  Fly   558 LQMAANI---AAGML------------YLSERKFVHRDLATRNCLINEHMAVKIADFGLSHKIYL 607
            |:.|.:|   .||:|            |.::.:..:.|.......::.:...:..:|   .|:..
  Fly   657 LENAKDIDCECAGVLPYYSGPQPDDEDYYNKEQITYEDALPNLIYVSRNHDYRRKEF---EKVIN 718

  Fly   608 QDY---YKGDENDFIPIRWMP-----------LESILYNKFSLESDVWAYGICLWEVFSFALQ-- 656
            .::   .|.||....|....|           |.:|.|..:.|.|:.....:...:...:.::  
  Fly   719 YEHLLSIKKDEEPTRPPTTTPAPTNATLAKERLAAINYENYRLNSEKKQRDLQDLDQHKYTIRHA 783

  Fly   657 -PYFGLTHEEVIKYIKEGNVLGCPDNTPLSVYAL 689
             |....:|..|::.::|    .|....|||.|.|
  Fly   784 LPKCQNSHASVVQQVEE----KCVAEEPLSGYEL 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:295308 27/182 (15%)
KR 217..299 CDD:214527 15/94 (16%)
PTKc_Musk 435..713 CDD:133181 54/306 (18%)
Pkinase_Tyr 441..707 CDD:285015 53/300 (18%)
SdrNP_001287331.1 Recep_L_domain 58..173 CDD:279382 14/57 (25%)
Furin-like 209..332 CDD:279142 22/133 (17%)
Recep_L_domain 347..461 CDD:279382 26/150 (17%)
FN3 491..578 CDD:214495 20/117 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455348
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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