DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrk and FER

DIOPT Version :10

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster


Alignment Length:296 Identity:103/296 - (34%)
Similarity:159/296 - (53%) Gaps:20/296 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   416 VTNVSDAKGTKPNARLEKLEYPRGDIVYVRSLGQGAFGRVFQARAPGLVPDQEDLLVAVKMLKDD 480
            ||..|.|...:|..| |:.|....|:|.:..:|:|.||.|::|:......|     ||||..:..
  Fly  1039 VTVKSGAILRRPVCR-ERWELSNDDVVLLERIGRGNFGDVYKAKLKSTKLD-----VAVKTCRMT 1097

  Fly   481 ASDQMQMDFEREACLLAEFDHPNIVRLLGVCALGRPMCLLFEYMAPGDLSEFLRACSPYATHQAP 545
            ..|:.:..|.:|..:|.::||||||:|:|:|...:|:.::.|.:..|.|..:||..|...|    
  Fly  1098 LPDEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLT---- 1158

  Fly   546 TQDRLQLNELHLLQMAANIAAGMLYLSERKFVHRDLATRNCLINEHMAVKIADFGLSHKIYLQDY 610
              .|.|:.      |..:.||||.||..:..:|||||.||||::...:|||:|||:|.:  .::|
  Fly  1159 --TRQQMG------MCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMSRE--EEEY 1213

  Fly   611 YKGDENDFIPIRWMPLESILYNKFSLESDVWAYGICLWEVFSFALQPYFGLTHEEVIKYIKEGNV 675
            ...|....||::|...|::.:.|::...|||:|||.:||:||....||.|:|:....:.|..|..
  Fly  1214 IVSDGMKQIPVKWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYR 1278

  Fly   676 LGCPDNTPLSVYALMRRCWNRKPSERPGFAEINHCI 711
            :..|.:||..:|.||.:||......||.|.||.:.:
  Fly  1279 MPTPKSTPEEMYRLMLQCWAADAESRPHFDEIYNVV 1314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:470581
KR 217..299 CDD:214527
PTKc_Musk 435..713 CDD:133181 96/277 (35%)
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 103/296 (35%)
PTKc_Fes_like 1067..1315 CDD:270637 93/267 (35%)
Blue background indicates that the domain is not in the aligned region.

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