DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrk and otk

DIOPT Version :9

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_523705.2 Gene:otk / 36283 FlyBaseID:FBgn0004839 Length:1033 Species:Drosophila melanogaster


Alignment Length:644 Identity:149/644 - (23%)
Similarity:260/644 - (40%) Gaps:142/644 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 RNMFIKSRGHFRLPNCSSLPHYNASMR-----RPNCSYIGLTELKESEVSYDCRNGNGRFYMGTM 231
            ||:..:.||::.....:|....||::.     .|..|...:..::.||             .||:
  Fly   435 RNVNSEHRGNYTCLATNSQGQINATV
AINVVVTPKFSVPPVGPIETSE-------------QGTV 486

  Fly   232 NVSKSGI----PCQRW--DTQYPHKHFQPPLVFHQLLEGENYCRNAGGEEPHPWCYTVDESVRWQ 290
            .:....|    |..:|  |.:|..::......|..|..|....||...|:...:..|:..|...:
  Fly   487 VMHCQAIGDPKPTIQWDKDLKYLSENNTDRERFRFLENGTLEIRNVQVEDEGSYGCTIGNSAGLK 551

  Fly   291 HCDIPM---------CPD------YVDPNAVDLNTPIKMEKFFTPSMIFLLAGIGFVAIVTLHLM 340
            ..|:.:         .|:      ::...||               :|.:...:.::.:| :.||
  Fly   552 REDVQLVVKTTGDGFAPEESGGDGFLVTRAV---------------LITMTVALAYIVLV-VGLM 600

  Fly   341 ILLVYKLSKHKDYSQPAGAATAECSVSMRGGG--DCGGNLNTSRE----TLGGNGNTNTLAKWGT 399
            :...|:....|       |...:.|....||.  |..||...|.:    :...||::.:.:|   
  Fly   601 LWCRYRRQARK-------ARLNDLSTKEAGGDQPDVAGNGKGSEQEPCLSKQHNGHSKSRSK--- 655

  Fly   400 IRSTATIHSNCVALTTVTNVSDAKGTKPNARL-EKLEYPRGDIVYVRSLGQGAFGRVF------- 456
             .|.....|:..|.:     ..::.:|.:|.: |:|..||..:..:..:|:|.||.||       
  Fly   656 -SSGDAQKSDDTACS-----QQSRASKKSAHIYEQLALPRSGLSELIQIGRGEFGDVFVGKLKAT 714

  Fly   457 --------------------------------------QARAPGLVPDQEDL------------- 470
                                                  :.|:...:.|.|::             
  Fly   715 LVTSPSDKDADTEKQHSNSENGSGGSGSGSTTLSTLNEKRRSKTSMDDIEEIKEEEQDQHNQSGL 779

  Fly   471 --LVAVKMLKDDASDQMQMDFEREACLLAEFDHPNIVRLLGVCALGRPMCLLFEYMAPGDLSEFL 533
              ||.||.|.....:|...:|.|:..||....|..:|||.|:|....|..::.||...|||.:||
  Fly   780 EQLVLVKALNKVKDEQACQEFRRQLDLLRAISHKGVVRLFGLCREKDPHYMVLEYTDWGDLKQFL 844

  Fly   534 RA-CSPYATHQAPTQDRLQLNELHLLQMAANIAAGMLYLSERKFVHRDLATRNCLINEHMAVKIA 597
            .| .....|..|.:.....|....:|.:|..||.||..:...:|.|||||||||:|:....||::
  Fly   845 LATAGKVNTATAGSSSPPPLTTSQVLAVAYQIARGMDAIYRARFTHRDLATRNCVISSEFIVKVS 909

  Fly   598 DFGLSHKIYLQDYYKGDENDFIPIRWMPLESILYNKFSLESDVWAYGICLWEVFSFALQ-PYFGL 661
            ...|....|.::|:| ..|..:||||:..|.|..::::.:||::|||:.:||:|:.|.: |:..|
  Fly   910 YPALCKDKYSREYHK-HRNTLLPIRWLAPECIQEDEYTTKSDIFAYGVVVWELFNQATKLPHEEL 973

  Fly   662 THEEVIKYIKEGNV-LGCPDNTPLSVYALMRRCWNRKPSERPGFAEINHCIQHSIAESE 719
            |:|:|::..:.|:: ....:.||.|:..::..||...|.|||.|:::...:..::..:|
  Fly   974 TNEQVVQRSQAGSLEWSVAEATPDSLREILLSCWVSNPKERPSFSQLGAALSKAMQSAE 1032

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:295308 9/44 (20%)
KR 217..299 CDD:214527 16/96 (17%)
PTKc_Musk 435..713 CDD:133181 94/340 (28%)
Pkinase_Tyr 441..707 CDD:285015 92/328 (28%)
otkNP_523705.2 I-set 26..115 CDD:254352
Ig 31..115 CDD:299845
IGc2 133..195 CDD:197706
Ig 268..373 CDD:299845
Ig 395..460 CDD:143165 7/24 (29%)
I-set 468..559 CDD:254352 20/103 (19%)
IGc2 484..549 CDD:197706 15/64 (23%)
PTK_CCK4 686..1026 CDD:133178 94/340 (28%)
STYKc 692..1020 CDD:214568 92/328 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1026
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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