DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrk and Pvr

DIOPT Version :10

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster


Alignment Length:770 Identity:167/770 - (21%)
Similarity:262/770 - (34%) Gaps:285/770 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 LIEEKKERNMFIKSRGHFRLPNCSSLPHYNASMRRPNCSYIGLTE----LKESEVSYDCR----- 220
            :|:.|:.|.:   ::.|..|.|.|.           |.:..|..:    .||..|::.|.     
  Fly   634 IIDGKERRTL---TKAHVLLGNISE-----------NMTIYGFDKDHKIAKEDNVNFTCEALAYH 684

  Fly   221 -NGNGRFYMGTMNVSKS-GIPCQRWDTQYPHKHFQPPLVFHQLLEGENYCR-------------- 269
             :||.::::...::.:| .:..:...|:|.:|.............|...||              
  Fly   685 FDGNLKWFINGEDLKESDSVHIETSHTKYSYKSTVHITTISDRDRGTYECRAYHNDKDAVYSSRE 749

  Fly   270 -------------NAGGEEPH-----PWCYTVD----------ESVRWQHCD------------- 293
                         ..||:|.|     ....|::          ..|||...|             
  Fly   750 IDLYVHDPSAPQWTNGGQEGHSKIKRKLSQTLELECASTAVPVAIVRWFKDDKEVTESKLRHIIE 814

  Fly   294 ----------------IPMCPDYVDPNAVDLNTPIKMEKFFTP--------SMIFLLAGIGFVAI 334
                            :..|   |..|.:|     ::|:.||.        ||.::..|: .:.:
  Fly   815 KESKLLITHLYPGDEGVYKC---VVENRLD-----RIERSFTVVISDLPGISMAWVWFGV-ILFL 870

  Fly   335 VTLHLMILLVYKLSK-HKDY--SQPAGAATAECSVSMRGGGDCGGNLNTSRETLGGNGNTNTLAK 396
            :.:.|.:.|..:..| ||.:  .:.||.|..|                        .|..     
  Fly   871 ILIGLCVFLAVRYQKEHKRHLALKAAGLANFE------------------------EGAV----- 906

  Fly   397 WGTIRSTATIHSNCVALTTVTNVSDAKGTKPNARLEKLEYPRGDIVYVRSLGQGAFGRVFQARAP 461
             |.|....|:......|             |..|  :.|:||.::...:.||.||||.|.:..|.
  Fly   907 -GHINPDLTLDEQAELL-------------PYNR--EFEFPRENLKLGKQLGAGAFGVVLKGEAK 955

  Fly   462 GLVPDQEDLLVAVKMLKDDASDQMQMDFEREACLLAEF-DHPNIVRLLGVCALG---RPMCLLFE 522
            |:..::....|||||:|..|.:::......|..::... .|.|:|.|||.....   |.:.::.|
  Fly   956 GIRREEPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNLLGAVTKNIAKRELMVIVE 1020

  Fly   523 YMAPGDLSEFL---RAC-----SP------------------------------YA--------- 540
            |...|::..||   |.|     :|                              ||         
  Fly  1021 YCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMSDNYELHRDTNGGGLKYANVGFPIHSY 1085

  Fly   541 ------------THQ--------------------------------------APTQDRLQLNE- 554
                        ||:                                      .|..|::..|. 
  Fly  1086 INEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQMDTCATVMTTVPEDDQIMSNNS 1150

  Fly   555 ---------------------LHLLQMAANIAAGMLYLSERKFVHRDLATRNCLINEHMAVKIAD 598
                                 :.|:..|..:|.||.|||.:|.:|.|||.||.|:.|...|||.|
  Fly  1151 VQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLSSKKVLHGDLAARNILLCEDNVVKICD 1215

  Fly   599 FGLSHKIYLQDYYKGDENDFIPIRWMPLESILYNKFSLESDVWAYGICLWEVFSFALQPYFGL-T 662
            |||:..:|..|.||..||..:||:|:.|||:..:.||..||||:|||.|||:||.|..||.|: .
  Fly  1216 FGLARSMYRGDNYKKSENGKLPIKWLALESLSDHVFSTYSDVWSYGIVLWEMFSLAKVPYPGIDP 1280

  Fly   663 HEEVIKYIKEGNVLGCPDNTPLSVYALMRRCWNRKPSERPGFAEINHCIQHSIAE 717
            ::|:...:.:|..:..|......:|.:|..||.:.|..||.|||:.....:.:.|
  Fly  1281 NQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRPLFAELEKRFANMLGE 1335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:470581 9/50 (18%)
KR 217..299 CDD:214527 20/159 (13%)
PTKc_Musk 435..713 CDD:133181 109/401 (27%)
PvrNP_001162911.1 IG_like 346..432 CDD:214653
Ig strand C 363..366 CDD:409353
Ig strand E 396..400 CDD:409353
Ig strand F 410..415 CDD:409353
Ig strand G 425..428 CDD:409353
Ig 458..533 CDD:472250
Ig strand B 459..463 CDD:409353
Ig strand C 472..476 CDD:409353
Ig strand E 497..503 CDD:409353
Ig strand F 513..518 CDD:409353
Ig 671..>742 CDD:472250 12/70 (17%)
Ig strand B 674..678 CDD:409353 1/3 (33%)
Ig strand C 687..691 CDD:409353 2/3 (67%)
Ig strand E 717..721 CDD:409353 0/3 (0%)
Ig strand F 731..736 CDD:409353 1/4 (25%)
Ig 779..851 CDD:472250 12/79 (15%)
Ig strand B 781..785 CDD:409570 0/3 (0%)
Ig strand C 794..798 CDD:409570 2/3 (67%)
Ig strand E 816..821 CDD:409570 0/4 (0%)
Ig strand F 831..836 CDD:409570 1/7 (14%)
Ig strand G 844..847 CDD:409570 1/2 (50%)
Protein Kinases, catalytic domain 927..1332 CDD:473864 109/404 (27%)
Blue background indicates that the domain is not in the aligned region.

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