DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrk and Ddr

DIOPT Version :9

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_001014474.3 Gene:Ddr / 3346209 FlyBaseID:FBgn0053531 Length:1054 Species:Drosophila melanogaster


Alignment Length:569 Identity:156/569 - (27%)
Similarity:237/569 - (41%) Gaps:146/569 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 SYDCRNGNGRF-YMGTMNVSKSGIPCQRWDTQYPHKHFQPPLVFHQLLEGENYCRNAGGEEPHPW 279
            |.|..||||.. .:.||:.::|.|              ....::|:......|...|..      
  Fly   545 SPDTLNGNGVLKVVTTMDDNESSI--------------DKNSLYHEPFNANMYTSAASA------ 589

  Fly   280 CYTVDESVRWQHCDIPMCPDYVD-PNAVDLNTPIKMEKFFTPSMIFLLAGIGFVAIVTLHLMILL 343
            |...|  ::.||    :.|||.| |:.|       .:.:..|.|..||..               
  Fly   590 CPMND--LQRQH----VSPDYTDVPDIV-------CQDYAVPHMQQLLPN--------------- 626

  Fly   344 VYKLSKHKDYSQPAGAATAECSVSMRGGGDCGGN----LNTSRETLGGNGNTNT----------- 393
                      :.|.|:.   |......|...|.:    :.|.:.|.....:.|.           
  Fly   627 ----------APPCGSG---CGTGTGTGPGRGSSPEFVVATGKVTASARNSLNAATLPLPSPPVP 678

  Fly   394 --LAKW----------------GTIRSTATIHSNCVALTTVT------------------NVSDA 422
              |.|:                |: :|:.::.|:..|.||.|                  |.:|.
  Fly   679 PPLEKYYAATPVSSKPMPVAPPGS-QSSGSLSSSTTAATTPTSGVVGVGKPHHYNLDMSANFADI 742

  Fly   423 KGTKPNARLEKLEYPRGDIVYVRSLGQGAFGRVFQARAPGLVPDQEDLLVAVKMLKDDASDQMQM 487
            ...:.|.:::  |:||..:|.|..||.|.||.:.......|    ...||||..|:..|:|.::.
  Fly   743 NEERANCQVQ--EFPRQSLVIVEKLGSGVFGELHLCETNVL----NATLVAVATLRPGANDHLRK 801

  Fly   488 DFEREACLLAEFDHPNIVRLLGVCALGRPMCLLFEYM-APGDLSEFLRACSPYATHQAPTQDRLQ 551
            :|..:|..||:...||:.||:|.|....|:|::.:|. ..|||::||:      .|.|.|...:.
  Fly   802 EFRSKAKQLAQLSDPNVARLVGACLRDEPICIVQDYSHCLGDLNQFLQ------EHVAETSGLMA 860

  Fly   552 LNELH---LLQMAANIAAGMLYLSERKFVHRDLATRNCLINEHMAVKIADFG--LSHKIYLQDY- 610
            ...|.   |:.:|..||:||.:|.:..|||||||||:|:|...:.||:...|  ::...|..|| 
  Fly   861 KKSLSFGCLVYIATQIASGMKHLEQMNFVHRDLATRSCIIGPELCVKVCSIGTVINRSAYASDYC 925

  Fly   611 ----YKGDENDFIPIRWMPLESILYNKFSLESDVWAYGICLWEVFSFAL-QPYFGLTHEEVIKYI 670
                :.|.::..:|||||..||:|..||:.:||||::.:.|||:.:||. |||..|:.:.||:.|
  Fly   926 QLEGFTGRQSQPMPIRWMAWESVLLGKFTTKSDVWSFAVALWEILTFAREQPYEHLSDKSVIENI 990

  Fly   671 -------KEGNVLGCPDNTPLSVYALMRRCWNRKPSERPGFAEINHCIQ 712
                   |...:|..|.|.|..:|.||..||.|..|.||.|.||:..:|
  Fly   991 GLIYRDYKMHELLPMPPNCPREIYDLMCECWQRDESSRPSFREIHLYLQ 1039

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:295308
KR 217..299 CDD:214527 16/82 (20%)
PTKc_Musk 435..713 CDD:133181 109/297 (37%)
Pkinase_Tyr 441..707 CDD:285015 103/284 (36%)
DdrNP_001014474.3 FA58C 106..262 CDD:214572
FA58C 109..261 CDD:238014
PTKc_DDR 753..1040 CDD:270644 109/297 (37%)
TyrKc 759..1038 CDD:197581 105/288 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455263
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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