DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrk and Musk

DIOPT Version :10

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_001032204.2 Gene:Musk / 18198 MGIID:103581 Length:893 Species:Mus musculus


Alignment Length:688 Identity:261/688 - (37%)
Similarity:344/688 - (50%) Gaps:165/688 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 EREENGYCAPYSGKVCKEYLT--GQVWY--SLEDPTGGWKNEQVTTALWDELISDLTGLCREAAE 123
            :::..||||.|.|:||...|.  ..|::  |..||...  .|.:....|:|| ..::.|||.|||
Mouse   335 QKDSQGYCAQYRGEVCDAVLAKDALVFFNTSYRDPEDA--QELLIHTAWNEL-KAVSPLCRPAAE 396

  Fly   124 KMLCAYAFPNCHMEGGRAVKAPLCFEDCQATHLQFCYNDWVLIEEKKERNMFIKSRGHFRLPNCS 188
            .:||.:.|..| ..|......|:|.|.|.|....||..:|..:|.|..|.::........:|.||
Mouse   397 ALLCNHLFQEC-SPGVVPTPMPICREYCLAVKELFCAKEWQAMEGKAHRGLYRSGMHLLPVPECS 460

  Fly   189 SLPHYNASMRR-PN-CSYIGLTELKESEVSYDCRNGNGRFYMGTMNVSKSGIPCQRWDTQYPHKH 251
            .||    ||.| |. |:.:...:.|:..:                             |.:|...
Mouse   461 KLP----SMHRDPTACTRLPYLDYKKENI-----------------------------TTFPSIT 492

  Fly   252 FQPPLVFHQLLEGENYCRNAGGEEPHPWCYTVDESVRWQHCDIPMCPDYVDPNAVDLNTPIKMEK 316
            ...|                                   ..|||             |.|.....
Mouse   493 SSRP-----------------------------------SADIP-------------NLPASTSS 509

  Fly   317 F-FTP--SMIFLLAGIGFVAIVTLHLMILLVYKLSKHKDYSQPAGAATAECSVSMRGGGDCGGNL 378
            | .:|  ||..:::.:...|:..| |.|..:|...:.|::.                        
Mouse   510 FAVSPAYSMTVIISIVSSFALFAL-LTIATLYCCRRRKEWK------------------------ 549

  Fly   379 NTSRETLGGNGNTNTLAKWGTIRSTATIHSNCVALTTVTN--VSDAKGTKP---------NARLE 432
            |..||                        |..|.|||:.:  :.|.....|         |.:|.
Mouse   550 NKKRE------------------------STAVTLTTLPSELLLDRLHPNPMYQRMPLLLNPKLL 590

  Fly   433 KLEYPRGDIVYVRSLGQGAFGRVFQARAPGLVPDQEDLLVAVKMLKDDASDQMQMDFEREACLLA 497
            .|||||.:|.|||.:|:||||||||||||||:|.:...:|||||||::||..||.||:|||.|:|
Mouse   591 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMA 655

  Fly   498 EFDHPNIVRLLGVCALGRPMCLLFEYMAPGDLSEFLRACSPYA----TH-QAPTQDRLQ------ 551
            |||:||||:||||||:|:||||||||||.|||:||||:.||:.    :| ...|:.|:.      
Mouse   656 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 720

  Fly   552 LNELHLLQMAANIAAGMLYLSERKFVHRDLATRNCLINEHMAVKIADFGLSHKIYLQDYYKGDEN 616
            |:....|.:|..:||||.||||||||||||||||||:.|.|.|||||||||..||..||||.|.|
Mouse   721 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGETMVVKIADFGLSRNIYSADYYKADGN 785

  Fly   617 DFIPIRWMPLESILYNKFSLESDVWAYGICLWEVFSFALQPYFGLTHEEVIKYIKEGNVLGCPDN 681
            |.|||||||.|||.||:::.||||||||:.|||:||:.||||:|:.|||||.|:::||:|.||:|
Mouse   786 DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN 850

  Fly   682 TPLSVYALMRRCWNRKPSERPGFAEINHCIQHSIAESE 719
            .||.:|.|||.||::.|::||.|..|:..:|.....:|
Mouse   851 CPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:470581 49/150 (33%)
KR 217..299 CDD:214527 6/81 (7%)
PTKc_Musk 435..713 CDD:133181 178/288 (62%)
MuskNP_001032204.2 IgI_1_MuSK 28..117 CDD:409562
Ig strand A 28..31 CDD:409562
Ig strand A' 35..39 CDD:409562
Ig strand B 45..52 CDD:409562
Ig strand C 58..63 CDD:409562
Ig strand C' 65..67 CDD:409562
Ig strand D 75..78 CDD:409562
Ig strand E 82..88 CDD:409562
Ig strand F 95..102 CDD:409562
Ig strand G 109..117 CDD:409562
IgI_2_MuSK 122..209 CDD:409560
Ig strand A 122..125 CDD:409560
Ig strand A' 129..131 CDD:409560
Ig strand B 137..145 CDD:409560
Ig strand C 151..156 CDD:409560
Ig strand C' 158..161 CDD:409560
Ig strand D 166..170 CDD:409560
Ig strand E 173..179 CDD:409560
Ig strand F 186..194 CDD:409560
Ig strand G 197..202 CDD:409560
Ig strand G' 204..209 CDD:409560
Ig 223..306 CDD:472250
Ig strand B 239..243 CDD:409353
Ig strand C 252..256 CDD:409353
Ig strand E 278..282 CDD:409353
Ig strand F 289..294 CDD:409353
Ig strand G 302..305 CDD:409353
CRD_TK_ROR_related 338..482 CDD:143578 49/151 (32%)
PTKc_Musk 593..882 CDD:133181 178/288 (62%)
Blue background indicates that the domain is not in the aligned region.

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