DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrk and ver-3

DIOPT Version :10

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_509836.1 Gene:ver-3 / 181289 WormBaseID:WBGene00006896 Length:1227 Species:Caenorhabditis elegans


Alignment Length:541 Identity:134/541 - (24%)
Similarity:202/541 - (37%) Gaps:165/541 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 PPLVFHQLLEGENYCR-----------NAGGEEPHPWCYTVDESVRWQHC-DIPMCPDYVDPNAV 306
            ||.|:....:|..|..           .|.||:...:           || ......|.::...|
 Worm   702 PPPVYQWFKDGNPYTHGDVDGSILRVSRARGEDDGEF-----------HCLATNRAGDKLNSIEV 755

  Fly   307 DLNTPIKMEKFFTPSMIFLLAGIGFVAIVTLHLMILLVYKLSKHKDYSQPAGAATAECSVSMRGG 371
            .:|...|...||...:..||. |..:|:..|...:....:|:|.||.:                 
 Worm   756 QVNNAPKGSLFFYWFLALLLL-ISIIAVFLLTCKLRASNRLTKQKDIA----------------- 802

  Fly   372 GDCGGNLNTSRETLGGNGNTNTLAKWGTIRSTATIHSNCVALTTVTNVSDAKGTKPNARLEKLEY 436
                  |||..||:                                 :....|..|.   |..:.
 Worm   803 ------LNTLYETM---------------------------------IKHQAGPLPE---EMKDL 825

  Fly   437 PRGDIVY-----------------VRSLGQGAFGRVFQ-----ARAPGLVPDQEDLLVAVKMLKD 479
            |..:..|                 :..:|.|.||.|.:     |.....:..:..|.||||...:
 Worm   826 PVEERTYYLPYNNDYEIDPVNLEILNPIGSGHFGVVKKGLLGMAYPKSKIESKTRLPVAVKSSTN 890

  Fly   480 DASDQMQMDFERE---ACLLAEFDHPNIVRLLGVCALGR---PMCLLFEYMAPGDLSEFLRACSP 538
            ..:.::|.....|   .|.:.:  :||::.|:|......   .:.::.|::..|:|.|||:|   
 Worm   891 PFNVELQKMMAEELKVMCAIPK--NPNVLALIGAVTKNMRQGQLYIVTEFIDGGNLREFLQA--- 950

  Fly   539 YATHQ------------APTQD-----------------------RLQLNE------LHLLQMAA 562
               |:            .|..|                       ||.:.:      ..||.:..
 Worm   951 ---HRNTFINELVEDEHVPVDDSYLVPNSVKKKIYKFDEKLGEGTRLLVEDPDALCTSDLLSIGL 1012

  Fly   563 NIAAGMLYLSERKFVHRDLATRNCLINEHMAVKIADFGLSHKIYLQDYY--KGDENDFIPIRWMP 625
            .||.||.:|::...||||||.||.||.:...|:|||||||.|...:.||  |..::..:|:||||
 Worm  1013 QIAKGMAWLADVPCVHRDLACRNVLITKTKIVRIADFGLSKKHTNKTYYRTKKSKDTPLPVRWMP 1077

  Fly   626 LESILYNKFSLESDVWAYGICLWEVFSFALQPYFGLTHEEVIKYIKEGNVLGCPDNTPLSVYALM 690
            ||.|...||:.:||||::||||:|:|:....||.......||::|:.||....|:.....:|.||
 Worm  1078 LECIEEFKFTQKSDVWSFGICLYEIFTLGGTPYPNCDTFNVIEFIRNGNRNKQPEYCHDEIYELM 1142

  Fly   691 RRCWNRKPSERPGFAEINHCI 711
            :.||...|.:||.|   |.||
 Worm  1143 KVCWQFNPKDRPTF---NDCI 1160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:470581
KR 217..299 CDD:214527 10/56 (18%)
PTKc_Musk 435..713 CDD:133181 101/348 (29%)
ver-3NP_509836.1 IG_like 242..>313 CDD:214653
IG_like 578..667 CDD:214653
Ig strand B 588..592 CDD:409353
Ig strand C 602..606 CDD:409353
Ig strand E 633..637 CDD:409353
Ig strand F 647..652 CDD:409353
Ig_3 672..744 CDD:464046 10/52 (19%)
PTKc 851..1164 CDD:270623 99/321 (31%)
Blue background indicates that the domain is not in the aligned region.

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