DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrk and ror1

DIOPT Version :10

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:XP_004913987.1 Gene:ror1 / 100498561 XenbaseID:XB-GENE-490892 Length:966 Species:Xenopus tropicalis


Alignment Length:656 Identity:223/656 - (33%)
Similarity:328/656 - (50%) Gaps:89/656 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 EENGYCAPYSGKVCKEYLTGQVWYSLEDPTGGWKNEQVTTALWDELI---SDLTGLCREAAEKML 126
            ||:|||.||.|..|..::.....|.......|....|:|.|.  .:|   |.|:..|.:.|...|
 Frog   193 EEDGYCQPYRGIACARFILNHTIYVESLHMQGEIENQITAAF--TMIGTSSHLSDKCSQFAIPSL 255

  Fly   127 CAYAFPNCHMEGGRAVKAP--LCFEDCQATHLQFCYNDWVLIEEKKERNMFIKSRGHFRLPNCSS 189
            |.||||.|......:...|  ||.::|:......|..:::....    |..|..|  .:||||..
 Frog   256 CHYAFPYCDENAPHSSPKPRDLCRDECEILENVLCQAEYIFARS----NPMILMR--LKLPNCED 314

  Fly   190 LPHYNASMRRPNCSYIGLTELKESEVSYDCRNGNGRFYMGTMNVSKSGIPCQRWDTQYPHKHFQP 254
            || ...|:...||..||:...:....::.|.|..|..|.||::.:|||..||.|::.:||.|...
 Frog   315 LP-LPDSLEARNCIRIGIPMTEPINKNHKCYNNTGVDYRGTVSATKSGRQCQPWNSNHPHTHTFN 378

  Fly   255 PLVFHQLLEGENYCRNAGGEEPHPWCYTVDESVRWQHCDIPMCPDYVDPNAVDLNTPIKMEKFF- 318
            .:.:.:|..|.:||||.|.:...|||:|:||:|:::.||||.|      ::.|.....|||..: 
 Frog   379 AIRYPELNGGHSYCRNPGNQREAPWCFTLDENVKYELCDIPAC------DSKDSKEKNKMEILYI 437

  Fly   319 -TPSMIFLLAGIGFVAIVTLHLMILLVYKLSKHKDYSQPAGAATAECSVSMRGGGDCGGNLNTSR 382
             .||:...||    :|::...:.|.    .:..|..|.||                    ....:
 Frog   438 LVPSVAIPLA----IALLFFFICIC----RNNQKASSPPA--------------------QRQPK 474

  Fly   383 ETLGGNGNTNTLAKWGTIRSTATIHSNCVALTTVTNVSDAKGTKPNARLEKLEYPRGDIVYVRSL 447
            ...|.|                            ..:|.....||.::.::|  |...:.::..|
 Frog   475 HVRGQN----------------------------VEMSMLNAYKPKSKAKEL--PLSAVRFMEEL 509

  Fly   448 GQGAFGRVFQAR--APGLVPDQEDLLVAVKMLKDDASDQMQMDFEREACLLAEFDHPNIVRLLGV 510
            |:.|||::::..  .||:...|   |||:|.|||..:.|...||::||.|:.|..|||||.|:||
 Frog   510 GECAFGKIYKGHLYLPGMDHAQ---LVAIKTLKDYNNPQQWSDFQQEASLMTELHHPNIVCLVGV 571

  Fly   511 CALGRPMCLLFEYMAPGDLSEFLRACSPYATHQAPTQD----RLQLNELHLLQMAANIAAGMLYL 571
            ....:|:|:|||:|..|||.|||...||::.....:.:    :..|:....|.:|..|||||.||
 Frog   572 VTQEQPVCMLFEFMNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYL 636

  Fly   572 SERKFVHRDLATRNCLINEHMAVKIADFGLSHKIYLQDYYKGDENDFIPIRWMPLESILYNKFSL 636
            |...|||:|||.||.|:.|.:.|||:|.|||.:||..|||:......:||||||.|:|||.|||.
 Frog   637 SSHFFVHKDLAARNILVGEQLHVKISDLGLSREIYSSDYYRVQNKSLLPIRWMPPEAILYGKFST 701

  Fly   637 ESDVWAYGICLWEVFSFALQPYFGLTHEEVIKYIKEGNVLGCPDNTPLSVYALMRRCWNRKPSER 701
            :||:|:||:.|||:|||.||||:|.:::|||:.:::..:|.|.::.|..:|:||..||...||.|
 Frog   702 DSDIWSYGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEIPSRR 766

  Fly   702 PGFAEI 707
            |.|.:|
 Frog   767 PRFKDI 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:470581 43/149 (29%)
KR 217..299 CDD:214527 34/81 (42%)
PTKc_Musk 435..713 CDD:133181 124/279 (44%)
ror1XP_004913987.1 IG_like 95..177 CDD:214653
Ig strand B 104..108 CDD:409570
Ig strand C 117..121 CDD:409570
Ig strand E 143..147 CDD:409570
Ig strand F 157..162 CDD:409570
Ig strand G 170..173 CDD:409570
CRD_FZ 194..337 CDD:470581 44/151 (29%)
KR 341..423 CDD:214527 34/87 (39%)
PTKc_Ror1 497..779 CDD:270672 125/281 (44%)
Blue background indicates that the domain is not in the aligned region.

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