DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrk and musk

DIOPT Version :10

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:XP_012808865.1 Gene:musk / 100485502 XenbaseID:XB-GENE-923007 Length:950 Species:Xenopus tropicalis


Alignment Length:743 Identity:304/743 - (40%)
Similarity:405/743 - (54%) Gaps:106/743 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VVERVLRGMVLKWGANLAVLGLCVFLF---ASATHANSLNAIEEPVT------RRHHQRHHERER 64
            |.|.:..|::|   :.|.|:.....||   |...|:.|....:...|      |.:        :
 Frog   257 VDENIRDGVIL---SKLHVIATRPGLFTCMADNKHSGSFGTAKAAATISISEWRLY--------K 310

  Fly    65 EENGYCAPYSGKVCKEYLT--GQVWYSLEDPTGGWKNEQVTTALWDELISDLTGLCREAAEKMLC 127
            .:.|||:.|.|.||...|.  ..|:::..:.......|.:....|:|| ..::..||.|||..||
 Frog   311 GDGGYCSTYRGDVCSSVLAKDSLVFFNSSNAEPEESQEMLAQTTWNEL-KTVSSFCRPAAEAFLC 374

  Fly   128 AYAFPNCHMEGGRAVKAPLCFEDCQATHLQFCYNDWVLIEEKKERNMFIKSRGHFRLPNCSSLPH 192
            .|.|..|:..|......|:|.|.|.|....:|:.||:.:||...:.::........||:|..||.
 Frog   375 NYFFQECNPTGEGPTPKPMCREHCLAVKDLYCFKDWLSMEENSRKGIYKHGLMLLALPDCDKLPR 439

  Fly   193 YNASMRRPN-CSYIGLTELKESEVSYDCRNGNGRFYMGTMNVSKSGIPCQRWDTQYPHKHFQPPL 256
            .   ...|. |:.|...||.:..::..|..||||.|.|::|.:.||||||:|..|.||.|.:.|.
 Frog   440 I---QNNPKVCTRIPFFELHKENITRTCYKGNGRHYQGSINTTTSGIPCQKWSQQLPHLHRRLPE 501

  Fly   257 VFHQLLEGENYCRNAGGEEPHPWCYTVDESVRWQHCDIPMCPDYVDPNAVDLNTPIKMEKFFTP- 320
            ||.:|...:|:|||.|||...|||||.|.:|||::|::|:|      .....|.|:..:..|.| 
 Frog   502 VFPELSNSDNHCRNPGGESERPWCYTTDPNVRWEYCNVPLC------GTSAANFPVTTKTAFGPP 560

  Fly   321 -----SMIFLLAGIGFVAIVTLHLMILLVYKLSKHKDYSQPAGAATAECSVSMRGGGDCGGNLNT 380
                 |..|..|....|.|.|:.:...:::.|                          ..|.:..
 Frog   561 VMPSTSSSFSPAHSMTVIISTISICAAMIFVL--------------------------IAGLICC 599

  Fly   381 SRETLGGNGNTNTLAKWGTIRSTATIHSNCVALTTVTN--VSDAKGTKP---------NARLEKL 434
            .|:....|.|....|.               .||.:.:  :.|.....|         |.:|..|
 Frog   600 RRQKKLNNKNREAAAP---------------TLTALPSELLLDRLHPNPMYQRMPLLLNHKLLNL 649

  Fly   435 EYPRGDIVYVRSLGQGAFGRVFQARAPGLVPDQEDLLVAVKMLKDDASDQMQMDFEREACLLAEF 499
            ||||.:|.|||.:|:||||||||||||||:..:...:|||||||::||..||.||:|||.|:|||
 Frog   650 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLSYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 714

  Fly   500 DHPNIVRLLGVCALGRPMCLLFEYMAPGDLSEFLRACSPYA----THQA-PTQDRL-QLNELHL- 557
            ||||||:||||||:|:||||||||||.|||:|:||..||.|    :|.: ..:.|| .||...| 
 Frog   715 DHPNIVKLLGVCAVGKPMCLLFEYMAHGDLNEYLRHRSPRALSSLSHSSLAAKVRLCDLNPSPLS 779

  Fly   558 ----LQMAANIAAGMLYLSERKFVHRDLATRNCLINEHMAVKIADFGLSHKIYLQDYYKGDENDF 618
                |.:|..:||||.||||||||||||||||||:.|:|.|||||||||..||..||||.:|||.
 Frog   780 CTDQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKANENDA 844

  Fly   619 IPIRWMPLESILYNKFSLESDVWAYGICLWEVFSFALQPYFGLTHEEVIKYIKEGNVLGCPDNTP 683
            |||||||.|||.||:::.||||||||:.|||:||:.:|||:|:.|||||.|:::||:|.||:|.|
 Frog   845 IPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNILSCPENCP 909

  Fly   684 LSVYALMRRCWNRKPSERPGFAEINHCI 711
            |.:|.|||.||::.||:||.||    ||
 Frog   910 LELYNLMRLCWSKMPSDRPSFA----CI 933

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:470581 44/147 (30%)
KR 217..299 CDD:214527 42/81 (52%)
PTKc_Musk 435..713 CDD:133181 182/288 (63%)
muskXP_012808865.1 Ig 28..117 CDD:472250
Ig strand B 45..49 CDD:409301
Ig strand C 58..62 CDD:409301
Ig strand E 82..86 CDD:409301
Ig strand F 96..101 CDD:409301
Ig strand G 110..113 CDD:409301
Ig 122..209 CDD:472250
Ig strand B 138..142 CDD:409353
Ig strand C 151..155 CDD:409353
Ig strand E 173..177 CDD:409353
Ig strand F 187..192 CDD:409353
Ig strand G 201..204 CDD:409353
Ig 215..303 CDD:472250 12/48 (25%)
Ig strand B 229..233 CDD:143205
Ig strand C 242..246 CDD:143205
Ig strand E 263..267 CDD:143205 1/3 (33%)
Ig strand F 279..284 CDD:143205 2/4 (50%)
Ig strand G 296..299 CDD:143205 0/2 (0%)
CRD_FZ 312..457 CDD:470581 44/148 (30%)
KR 462..543 CDD:214527 42/86 (49%)
PTKc_Musk 650..939 CDD:133181 182/288 (63%)
Blue background indicates that the domain is not in the aligned region.

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