DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrk and musk

DIOPT Version :9

Sequence 1:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster
Sequence 2:XP_012808865.1 Gene:musk / 100485502 XenbaseID:XB-GENE-923007 Length:950 Species:Xenopus tropicalis


Alignment Length:743 Identity:304/743 - (40%)
Similarity:405/743 - (54%) Gaps:106/743 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VVERVLRGMVLKWGANLAVLGLCVFLF---ASATHANSLNAIEEPVT------RRHHQRHHERER 64
            |.|.:..|::|   :.|.|:.....||   |...|:.|....:...|      |.:        :
 Frog   257 VDENIRDGVIL---SKLHVIATRPGLFTCMADNKHSGSFGTAKAAATISISEWRLY--------K 310

  Fly    65 EENGYCAPYSGKVCKEYLT--GQVWYSLEDPTGGWKNEQVTTALWDELISDLTGLCREAAEKMLC 127
            .:.|||:.|.|.||...|.  ..|:::..:.......|.:....|:|| ..::..||.|||..||
 Frog   311 GDGGYCSTYRGDVCSSVLAKDSLVFFNSSNAEPEESQEMLAQTTWNEL-KTVSSFCRPAAEAFLC 374

  Fly   128 AYAFPNCHMEGGRAVKAPLCFEDCQATHLQFCYNDWVLIEEKKERNMFIKSRGHFRLPNCSSLPH 192
            .|.|..|:..|......|:|.|.|.|....:|:.||:.:||...:.::........||:|..||.
 Frog   375 NYFFQECNPTGEGPTPKPMCREHCLAVKDLYCFKDWLSMEENSRKGIYKHGLMLLALPDCDKLPR 439

  Fly   193 YNASMRRPN-CSYIGLTELKESEVSYDCRNGNGRFYMGTMNVSKSGIPCQRWDTQYPHKHFQPPL 256
            .   ...|. |:.|...||.:..::..|..||||.|.|::|.:.||||||:|..|.||.|.:.|.
 Frog   440 I---QNNPKVCTRIPFFELHKENITRTCYKGNGRHYQGSINTTTSGIPCQKWSQQLPHLHRRLPE 501

  Fly   257 VFHQLLEGENYCRNAGGEEPHPWCYTVDESVRWQHCDIPMCPDYVDPNAVDLNTPIKMEKFFTP- 320
            ||.:|...:|:|||.|||...|||||.|.:|||::|::|:|      .....|.|:..:..|.| 
 Frog   502 VFPELSNSDNHCRNPGGESERPWCYTTDPNVRWEYCNVPLC------GTSAANFPVTTKTAFGPP 560

  Fly   321 -----SMIFLLAGIGFVAIVTLHLMILLVYKLSKHKDYSQPAGAATAECSVSMRGGGDCGGNLNT 380
                 |..|..|....|.|.|:.:...:::.|                          ..|.:..
 Frog   561 VMPSTSSSFSPAHSMTVIISTISICAAMIFVL--------------------------IAGLICC 599

  Fly   381 SRETLGGNGNTNTLAKWGTIRSTATIHSNCVALTTVTN--VSDAKGTKP---------NARLEKL 434
            .|:....|.|....|.               .||.:.:  :.|.....|         |.:|..|
 Frog   600 RRQKKLNNKNREAAAP---------------TLTALPSELLLDRLHPNPMYQRMPLLLNHKLLNL 649

  Fly   435 EYPRGDIVYVRSLGQGAFGRVFQARAPGLVPDQEDLLVAVKMLKDDASDQMQMDFEREACLLAEF 499
            ||||.:|.|||.:|:||||||||||||||:..:...:|||||||::||..||.||:|||.|:|||
 Frog   650 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLSYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 714

  Fly   500 DHPNIVRLLGVCALGRPMCLLFEYMAPGDLSEFLRACSPYA----THQA-PTQDRL-QLNELHL- 557
            ||||||:||||||:|:||||||||||.|||:|:||..||.|    :|.: ..:.|| .||...| 
 Frog   715 DHPNIVKLLGVCAVGKPMCLLFEYMAHGDLNEYLRHRSPRALSSLSHSSLAAKVRLCDLNPSPLS 779

  Fly   558 ----LQMAANIAAGMLYLSERKFVHRDLATRNCLINEHMAVKIADFGLSHKIYLQDYYKGDENDF 618
                |.:|..:||||.||||||||||||||||||:.|:|.|||||||||..||..||||.:|||.
 Frog   780 CTDQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKANENDA 844

  Fly   619 IPIRWMPLESILYNKFSLESDVWAYGICLWEVFSFALQPYFGLTHEEVIKYIKEGNVLGCPDNTP 683
            |||||||.|||.||:::.||||||||:.|||:||:.:|||:|:.|||||.|:::||:|.||:|.|
 Frog   845 IPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNILSCPENCP 909

  Fly   684 LSVYALMRRCWNRKPSERPGFAEINHCI 711
            |.:|.|||.||::.||:||.||    ||
 Frog   910 LELYNLMRLCWSKMPSDRPSFA----CI 933

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrkNP_477255.1 CRD_FZ 67..212 CDD:295308 44/147 (30%)
KR 217..299 CDD:214527 42/81 (52%)
PTKc_Musk 435..713 CDD:133181 182/288 (63%)
Pkinase_Tyr 441..707 CDD:285015 176/276 (64%)
muskXP_012808865.1 Ig 28..117 CDD:386229
I-set 121..208 CDD:369462
Ig 215..303 CDD:386229 12/48 (25%)
CRD_FZ 312..457 CDD:382974 44/148 (30%)
KR 462..543 CDD:214527 42/86 (49%)
PTKc_Musk 650..939 CDD:133181 182/288 (63%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 359 1.000 Domainoid score I963
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4084
Inparanoid 1 1.050 530 1.000 Inparanoid score I1197
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222671at33208
OrthoFinder 1 1.000 - - FOG0008235
OrthoInspector 1 1.000 - - oto104623
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4742
SonicParanoid 1 1.000 - - X6208
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.100

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