DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ack-like and epha4a

DIOPT Version :9

Sequence 1:NP_001260935.1 Gene:Ack-like / 36442 FlyBaseID:FBgn0263998 Length:1495 Species:Drosophila melanogaster
Sequence 2:XP_005171372.1 Gene:epha4a / 64271 ZFINID:ZDB-GENE-001207-7 Length:1034 Species:Danio rerio


Alignment Length:371 Identity:129/371 - (34%)
Similarity:180/371 - (48%) Gaps:47/371 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 IPADSISVNKQLGTGEFGIVQQG-VWSNGNERIQVAIKCLCRERMQSNPMEFLKEAAIMHSIEHE 191
            |.|..|.:.|.:|.||||.|..| :...|...|.||||.|..........:||.||:||...:|.
Zfish   654 IDASCIKIEKVIGIGEFGEVCSGRLKMPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 718

  Fly   192 NIVRLYGVVLATDSLMLVTELAHLRSLLECLKDSGLRVSFLTIPTLCEFALQICNGMRYLEQKRL 256
            ||:||.|||.....:|::||.....||...|:.:..|   .|:..|......|.:||:||.....
Zfish   719 NIIRLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR---FTVIQLVGILRGIASGMKYLSDMSY 780

  Fly   257 IHRDLAARNILVFSKDKVKISDFGLSRALGVGKDYYKTNFNV-------NLKLPIAWCAPECINY 314
            :|||||||||||.|....|:||||:||.|....|...|...:       ..|:||.|.|||.|.|
Zfish   781 VHRDLAARNILVNSNLVCKVSDFGMSRVLEEDPDAAYTTREITGTYQSQGGKIPIRWTAPEAITY 845

  Fly   315 LRFTNASDVWAFGVCLWEMFSYGFQPWAALTGLQILEAIDAPNYQRLEQPDCCPSEYYTLMMKCW 379
            .:||:|||||::|:.:||:.|||.:|:..::...:::||: ..| ||..|..||...:.||:.||
Zfish   846 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE-EGY-RLPPPMDCPVSLHQLMLDCW 908

  Fly   380 QDDAAKRPRFGEIYDQLPDM--KPEQLK------AVVNCT--EPKKDHLLYRQGDIISVLDRNTG 434
            |.:.|:||:|.:|.:.|..:  .|..||      |..|.|  ||.........|   ||.|    
Zfish   909 QKERAERPKFSQIVNMLDKLIRNPNSLKRTGGEIARPNTTLLEPSSPEFTSTLG---SVAD---- 966

  Fly   435 TPFWKGVLSTGK-------TGYFNPSNTVAFLEGLPSSTRDSFSRV 473
               |...::..:       .||..|       |.:...|::..:|:
Zfish   967 ---WLQAINMERYRDNFTAAGYTTP-------EAVVHMTQEDMTRI 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ack-likeNP_001260935.1 SAM_TNK-like 4..65 CDD:188938
STYKc 133..396 CDD:214568 107/270 (40%)
PTKc_Ack_like 137..398 CDD:270636 107/268 (40%)
SH3 400..454 CDD:214620 16/68 (24%)
CRIB 486..525 CDD:238077
epha4aXP_005171372.1 EphR_LBD_A4 33..206 CDD:198450
FN3 332..438 CDD:238020
FN3 443..534 CDD:238020
EphA2_TM 554..654 CDD:291255 129/371 (35%)
PTKc_EphR_A 654..929 CDD:270651 110/279 (39%)
Pkinase_Tyr 659..925 CDD:285015 107/270 (40%)
SAM_EPH-A4 959..1029 CDD:188944 11/61 (18%)
SAM 960..1023 CDD:197735 11/60 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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