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Protein Alignment Ack-like and csk-1

DIOPT Version :9

Sequence 1:	NP_001260935.1	Gene:	Ack-like / 36442	FlyBaseID:	FBgn0263998	Length:	1495	Species:	Drosophila melanogaster
Sequence 2:	NP_001293162.1	Gene:	csk-1 / 266817	WormBaseID:	WBGene00000812	Length:	624	Species:	Caenorhabditis elegans

Alignment Length:	405	Identity:	122/405 - (30%)
Similarity:	189/405 - (46%)	Gaps:	84/405 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    64 HFP--HSYLSK--IKRLLQA--PGTMVKREEA--PG--------------------GGSQVALD- 99
            |.|  ||.:|:  .::||:.  .||.:.||..  ||                    .|.|:..|
Worm   233 HQPWFHSMISRENTEKLLRGKPDGTFLVRESTNFPGDFTLCMSFHGKVEHYRIEQTSGGQLTCDK 297

  Fly   100 ---------------GSSASACSSLA----------AKNGASS---------PSKVPNNKH---I 127
                           ..:...|..|.          :.||:||         ..:....:|   :
Worm   298 EEYFSNLTQLVSHYKRDADGLCHRLVTPIICETATFSSNGSSSFGSSSTVDLEDRTSVFRHAGLV 362

  Fly   128 IPADSISVNKQLGTGEFGIVQQGVWSNGNERIQVAIKCLCRERMQSNPM--EFLKEAAIMHSIEH 190
            |.::.|.|...:|.||||.|:.|.:.|.    :||:|.   .:...|.|  ..|.||..|..:.|
Worm   363 ISSNDIDVGDTIGHGEFGDVRLGTYKNR----KVALKV---SKRHGNGMLDSLLDEAKFMVGLSH 420

  Fly   191 ENIVRLYGVVLATDSLMLVTELAHLRSLLECLKDSGLRVSFLTIPTLCEFALQICNGMRYLEQKR 255
            .|:|.|.||||...::.::||.....:|::.|:..|...  |....|..||:.||.||.|||.|:
Worm   421 PNLVTLVGVVLDDVNVYMITEYMANGNLIDLLRSRGRHA--LERRQLMMFAMDICQGMCYLESKQ 483

  Fly   256 LIHRDLAARNILVFSKDKVKISDFGLSRALGVGKDYYKTNFNVNLKLPIAWCAPECINYLRFTNA 320
            ::||||||||:|:......|:|||||::     |...:::.:.:.|.||.|.|||.:.:.:||..
Worm   484 IVHRDLAARNVLLDDDLVAKVSDFGLAK-----KANSQSHDSASGKFPIKWTAPEALRHSQFTTK 543

  Fly   321 SDVWAFGVCLWEMFSYGFQPWAALTGLQILEAIDAPNYQRLEQPDCCPSEYYTLMMKCWQDDAAK 385
            ||||:||:.|||:||:|..|:..:....::..|: ..| |:|.|:.||.|.:.:|.:.|...|..
Worm   544 SDVWSFGILLWEIFSFGRVPYPRIPIQDVVRYIE-KGY-RMEAPEGCPPEIFKVMNETWALSAQD 606

  Fly   386 RPRFGEIYDQLPDMK 400
            ||.||::..:|..::
Worm   607 RPSFGQVLQRLTTIR 621

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.