DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ack-like and R11E3.1

DIOPT Version :9

Sequence 1:NP_001260935.1 Gene:Ack-like / 36442 FlyBaseID:FBgn0263998 Length:1495 Species:Drosophila melanogaster
Sequence 2:NP_500644.2 Gene:R11E3.1 / 187810 WormBaseID:WBGene00020003 Length:549 Species:Caenorhabditis elegans


Alignment Length:495 Identity:137/495 - (27%)
Similarity:212/495 - (42%) Gaps:118/495 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TESELQQYYNAVKNEL-----KITNAAQFKYAADEDLRFIGLSRPEIRRLRKFYEKHFPHSYLSK 72
            ||:|.....:..|:||     |:.|....::  |......|...|.|..|...|  |..::..:|
 Worm   133 TETEQTNTKSDAKSELNLGERKMRNMVIRRF--DGKFGIKGNLFPTIEALLANY--HVTNALETK 193

  Fly    73 IKRLLQAPGTMVKREEAPGGGSQVALDGSSASACSSLAAKNGASSPSKVPNNKHIIPADSISVNK 137
            ..|.|:.|..:                                    :|..|:|    .::.:..
 Worm   194 ENRFLKTPIDL------------------------------------QVWENRH----SAVKLGD 218

  Fly   138 QLGTGEFGIVQQGVWSNGNERIQVAIKCLCRERMQSNPM---EFLKEAAIMHSIEHENIVRLYGV 199
            :||.|.:|.|::||....|:::.||:|.:  :..:.|.|   |.:.||.:|.:.:|:||||.:||
 Worm   219 KLGEGAYGEVRKGVLHRKNKKLDVAVKLM--KGGELNKMKIREMMNEARLMRNFKHKNIVRFFGV 281

  Fly   200 VLATDSLMLVTELAHLRSLLECLKDSGLRVSFLTIPTLCEFALQICNGMRYLEQKRLIHRDLAAR 264
            .:....|.::.||.:..:|...|:.:  :||.|.:..:|..|.|   |::||.....||||:|||
 Worm   282 AVVEQPLYILLELVNGGALNTYLQKN--KVSDLELMRMCLGAAQ---GLQYLHANHCIHRDIAAR 341

  Fly   265 NILVFSKDK-VKISDFGLSRALGVGKDYYKTNFNVNLKLPIAWCAPECINYLRFTNASDVWAFGV 328
            |.| :|.|| ||:||||||   .||..|   ......||||.|.|||.|....||..:||:::||
 Worm   342 NCL-YSNDKVVKLSDFGLS---VVGNQY---KLCAAQKLPIKWLAPETITTRFFTPKTDVYSYGV 399

  Fly   329 CLWEMFSYGFQPWAALTGL----QILEAIDAPNYQRLEQPDCCPSEYYTLM-MKCWQDDAAKR-- 386
            ..:|:||.|.:||..:|..    .::..|:      |..|:.||.::.:.: .|.:..|..:|  
 Worm   400 MCFEIFSNGAEPWEGVTNTVTKNNVVNGIN------LVIPESCPEKFRSFVHEKIFVVDPKRRVV 458

  Fly   387 ----PRFGEIYDQLPDM-KPEQLKAVVNCTEPKKDHLLYRQGDIISVLDRNTGTPFWKGVLSTGK 446
                .||  |...:.|| ....:..::|....|.|   |.|                       |
 Worm   459 MDDVSRF--IEPIINDMHNAAAVSTMLNLASDKSD---YNQ-----------------------K 495

  Fly   447 TGYFNPSNTVAFL-EGLPSSTRDSFSRVSDHRISKRKLRT 485
            |...|.|..|..| ...|.:..:|..: :|:|   ||.||
 Worm   496 TSDANRSMMVPNLTSSTPRNATNSMKQ-NDYR---RKTRT 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ack-likeNP_001260935.1 SAM_TNK-like 4..65 CDD:188938 14/56 (25%)
STYKc 133..396 CDD:214568 94/277 (34%)
PTKc_Ack_like 137..398 CDD:270636 94/275 (34%)
SH3 400..454 CDD:214620 8/53 (15%)
CRIB 486..525 CDD:238077 137/495 (28%)
R11E3.1NP_500644.2 SH2_Fps_family 73..191 CDD:198224 15/61 (25%)
STYKc 214..466 CDD:214568 93/273 (34%)
PTKc 218..467 CDD:270623 93/270 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.