DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ack-like and lrit2

DIOPT Version :9

Sequence 1:NP_001260935.1 Gene:Ack-like / 36442 FlyBaseID:FBgn0263998 Length:1495 Species:Drosophila melanogaster
Sequence 2:XP_002933949.1 Gene:lrit2 / 100497156 XenbaseID:XB-GENE-923281 Length:570 Species:Xenopus tropicalis


Alignment Length:540 Identity:107/540 - (19%)
Similarity:177/540 - (32%) Gaps:194/540 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 ASSPSKVPNNKHIIPADSISVN------KQLGTGEFGIVQ--QGVWSNGNERIQVA-------IK 164
            :||..|:|::   ||.|...:.      .:|..|.||.|.  ..:|.|.| .|.|.       :|
 Frog    42 SSSLKKIPSD---IPPDIRKIRIENCHLTELSRGSFGSVHTLHYLWLNFN-NITVMQMKSLEDVK 102

  Fly   165 CLCRERMQSNPMEFLKEAAIMHSIEHENIVRLYGVVLATDSLMLVTELAHLRSLLECLKDSGLRV 229
            .|...|:|.|.:..:...|...                |.:|.:: :|.|.|             
 Frog   103 SLTELRLQGNKLRSIPWTAFQD----------------TPNLKIL-DLKHNR------------- 137

  Fly   230 SFLTIPTLCEFALQICNGMRYLEQKRLIHRDLAARNILVFSKDKVKISDFGLSRALGVGKDYYKT 294
                :..|.|.||:....:.||        ||:...:.|.|||  ..:::.|         |.|.
 Frog   138 ----LDVLPEHALKFLANLTYL--------DLSFNQLTVISKD--VFANWPL---------YQKA 179

  Fly   295 NFNVNLKLPIAWCAPECINYLRFTNASDVWAFGV-CLWEMFSYGFQPWAA---LTG-LQILEAID 354
            :                    |.....||.:..| .|.|      .||..   |.| :|.::|:.
 Frog   180 H--------------------RSDRREDVLSNAVLALHE------NPWTCDCRLKGFVQFVKAVS 218

  Fly   355 APNYQRLEQPDCCPSEYYTLMMKCWQDDAAKRPRFGEIYDQLPDMKPEQLKAVVNCTEPKKDHLL 419
            .|                .::|..:....:...:.|:.:.:: |:|        :|.:|      
 Frog   219 PP----------------IILMNSYLTCISPNSKAGKFFHEI-DLK--------SCLKP------ 252

  Fly   420 YRQGDIISVLDRNTGTPFWKGVLSTGKTGYF------NPSNTVAFLEGLPSSTRDSFSRVSDHRI 478
                 ::|       ||.....:..|.....      :|..::.:..||  ....:|: ||...|
 Frog   253 -----LVS-------TPLSNLTIQVGLNATLSCFVKASPMPSIWWTYGL--KVVKAFN-VSTTTI 302

  Fly   479 SKRKLRTEMISKPQNDFKHTGHVGIDGATFGDIA--FLGSSQNYNHVPKQIVTPYKPSEDIEQTP 541
            ::..:::|:|..       ..|| .|...:..||  |||:|.      ..|:...:.::....:|
 Frog   303 NEETIKSELIIP-------AVHV-TDAGIYKCIATNFLGNSS------ASILLNVQSNKLGNASP 353

  Fly   542 LL---LPPTPTSPD---------SLQTASG----YFPEGANSGGAMGTSMNPTFIPSAEHTPKLI 590
            .|   |||:.:|..         |.|||.|    :|....|.|....|    .:....|.|.|.:
 Frog   354 SLSYSLPPSSSSSQEHVFIDLRISKQTAYGISLEWFAVTENPGETWYT----IYFGKYEDTQKEV 414

  Fly   591 ATNGQSSFDFASGSTNPFFP 610
            ...|...:.:   |.|...|
 Frog   415 INIGPGIYSY---SVNDLLP 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ack-likeNP_001260935.1 SAM_TNK-like 4..65 CDD:188938
STYKc 133..396 CDD:214568 51/282 (18%)
PTKc_Ack_like 137..398 CDD:270636 51/274 (19%)
SH3 400..454 CDD:214620 8/59 (14%)
CRIB 486..525 CDD:238077 11/40 (28%)
lrit2XP_002933949.1 leucine-rich repeat 56..79 CDD:275378 5/22 (23%)
LRR_8 57..114 CDD:338972 15/57 (26%)
leucine-rich repeat 80..103 CDD:275378 5/23 (22%)
LRR_8 103..162 CDD:338972 18/100 (18%)
leucine-rich repeat 104..127 CDD:275378 6/38 (16%)
leucine-rich repeat 128..151 CDD:275378 8/40 (20%)
leucine-rich repeat 152..165 CDD:275378 4/20 (20%)
leucine-rich repeat 176..203 CDD:275378 10/52 (19%)
TPKR_C2 199..249 CDD:387596 11/74 (15%)
IG_like 259..343 CDD:214653 20/100 (20%)
fn3 373..444 CDD:365830 16/66 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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