DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cap-G and ncapg

DIOPT Version :10

Sequence 1:NP_995827.2 Gene:Cap-G / 36440 FlyBaseID:FBgn0259876 Length:1351 Species:Drosophila melanogaster
Sequence 2:NP_001243134.2 Gene:ncapg / 492707 ZFINID:ZDB-GENE-041111-282 Length:1003 Species:Danio rerio


Alignment Length:1112 Identity:268/1112 - (24%)
Similarity:463/1112 - (41%) Gaps:245/1112 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 QAELKESLHKRYSKEMQQLYAKMGHESFRKAFINVLK---AVLGAEEGNENA-NMALNFCATFVT 121
            :|:|..||...|:|...:       ..|.:.||..||   .:...|...||. :....|.|:|..
Zfish    23 KAKLVASLKNGYNKLEDK-------TQFHEEFIRCLKYAMIIYTREPAVENVIDFVTKFAASFEI 80

  Fly   122 SSDSDGTE--------PMLAETFHWLLTTYSSNPH-IRYRICYFVNLILKELGPNAALDDHQCDD 177
            ..:.:..|        ..|...|::||.::.:|.| :|:|:|..||.:|..|..||.:||..||.
Zfish    81 PVNEEAEEEEEEEEDNEFLNFLFNFLLESHGANSHAVRFRVCQLVNKLLGSLSENAQIDDDLCDR 145

  Fly   178 ILEAMLDRVKDVSASVRKQAVLAMQRLQNPDNPSDVVVGAYMYHLTSDPSPNVRQCIITCMGRNY 242
            |.||||.||.|...:||.||.|||.|||:|.|.....:.||:..|.:|.:|.||:.:::|:..:.
Zfish   146 IHEAMLVRVTDKYPNVRIQAALAMARLQDPTNSDCPTIKAYVLLLENDSNPEVRRAVLSCIAPSA 210

  Fly   243 ITIPHILERLWDVDEKVRRHTYVNMC-NYPVRSYKVAQRLTLLEQGLNDTSATVRKTVINFMLKT 306
            :|:|.|.:|..||.||||:..|..:. ...:|:..:|||::||.:||:|:|.:|::.|...:|..
Zfish   211 VTLPKIYKRTRDVKEKVRKLAYEVLAEKVHIRALSIAQRVSLLHEGLSDSSDSVKEVVRAHLLPA 275

  Fly   307 WIESYQQNYVALIAALKLDSNEEELLRFRRVAKQMLRVIFQQT----DIKQLIDQLPLSEDCELH 367
            |:...|.:.:.|:..|.:::..:       .|...|..||...    |:.|  :.:.|.|    .
Zfish   276 WLRLLQGDVLQLLHRLDVENCAD-------TAVTALHAIFSMATSPDDLMQ--NGVRLDE----R 327

  Fly   368 RCIPHDSVTVELLLYWQCLSEYLETEAPE----IESLLPELSVFCTYMDKF-------CQFQKPD 421
            :.||.:|:|.|.:|||:.|.|:::::..|    :|.||||.:::..|:..|       .:.|:.|
Zfish   328 KLIPVNSLTCENVLYWRALCEFVKSKGNEGEELLEQLLPEAAIYAEYLYSFLKSITQLSEAQRTD 392

  Fly   422 MDKFAQVEFQ----NMLLSLVEILETYDLGDEIGRGNMRLLITNLLKDCLLDHKIVRVLVRCMEQ 482
            |.:...|..|    ..|:.||..|:|   .:|.||..|..::..:|........::.:||..:..
Zfish   393 MTQLEMVMTQEFVGQQLILLVGCLDT---SEEGGRKRMVAVLQEILVMPNTPVSLIGLLVEKLVN 454

  Fly   483 LITDTNDRIQYFIEIIYEL-------------CELNTKQNDLIHDRSLINKLLDDLDTPLK---- 530
            ::.|...:||...|||.::             .|...||..|...|..|.:....|:..:.    
Zfish   455 ILRDDAQKIQMVAEIISDVREPIFPISEPVDENEKRRKQVRLAEVRVQIMEAKQTLEDCISCQDF 519

  Fly   531 MKISSLKVKILELEELEGNYVRQREYIRAQSVNDEKIAVTEEYT---------ELIRPLLEKHGV 586
            .:.:.||..|.:||||: |.:.......|::|.:::|..::..|         ||.:.:..|.||
Zfish   520 SRAAELKDSISQLEELK-NQLTLEVSQPAENVKEQRIEKSDPETLLKCLTMCAELFKQMSIKRGV 583

  Fly   587 -------IEMPTRPKLSKQERVLKGLYISYYMTASPHVHKLTPSLCQLYKDFICRYLPCAEVDIF 644
                   ||....|.:|.....::.:.:....||:.|           .||....:|        
Zfish   584 CPTMIALIESLILPSVSNPNPAVRNMAVICLGTAALH-----------SKDLANTHL-------- 629

  Fly   645 EWSIKCGTTFSIFYEAYSREVFEVVVVQFCKNNNVRLCEASANCILELLDRYGVDYFND-----L 704
                                   |:::|..:.:..::..::...:::.|...|:|...|     .
Zfish   630 -----------------------VLLLQITQLDEPKIRISALRSLIDQLLLNGLDILQDKPVPPT 671

  Fly   705 NQTGGSLSKTKRRQLYTMQELYDDDDGSQSQNNEQNSDILVVLGHYLE------RVQHRGVGMAI 763
            :||..|            .::.|.....|::.......||.:|..:|:      |.:       .
Zfish   672 SQTPDS------------PDISDRQPEKQAEEESPVQSILKMLSEFLDSEVCELRTE-------T 717

  Fly   764 VRGLCRLVLRGHVDDRTDVLELLLKRYFNPNTE--PIINQVLGLFFEELRRLNKHSLLQPC---- 822
            ..||.:|:..|.:.. ..:|..|:..::||.||  ..:...||:|.:...|.::.:  |.|    
Zfish   718 AEGLAKLMYCGRILS-PKLLSRLVLLWYNPVTEDDQRLRHCLGVFLQLYARASRAN--QECVEES 779

  Fly   823 FLPTVWT---CNYDSPLHGVQPEHLTKFFLEMT-----VQEMSTPQTNIHNKIAISFLQYIQNYF 879
            ||||:.|   ....|||..|...::.:.|:|:|     ||.......::|:.:|:.....|    
Zfish   780 FLPTMRTLFNAPVTSPLSEVDASNVAELFVELTRPSALVQPAVVQAVSVHDSLALRVCNEI---- 840

  Fly   880 TERKDM----CRLLAKELTNLSINVLNGPEVKAELLALAENLIQSELD---PRMIKCIQNFKLVV 937
              .:|:    .||..|.|:.|.||...|| ...||..|.::::|...|   .|:|:.:.|..:..
Zfish   841 --LRDVSAPEVRLYCKTLSWLEINTEPGP-ANNELQLLLKDILQEVKDKYCTRVIEKLCNQLIGD 902

  Fly   938 NGSFNPPPRRNPDEGESDEEYETATVTTAES--ETAVPAQSQPPVTEESPNDVTQSAAITAVDAT 1000
            :||            :|....:||.:...|:  |.....:::|...:..     |..|.||.:..
Zfish   903 HGS------------KSASNQDTALLNLDENNGELMNKDETKPKRAKRG-----QKKAATAKNGK 950

  Fly  1001 ETPKAAAPPAPVPEPIVTTFGKDNIVGIRHLRRSMAISHSDAESLLGPQ---SPNPEESTESEAV 1062
            ::.||                            .|:...||.|::  |:   |..|....:..|:
Zfish   951 KSYKA----------------------------DMSSDESDEENI--PEEAPSVRPSRRAKIAAL 985

  Fly  1063 ETSKQNL 1069
            :.:||:|
Zfish   986 DKTKQDL 992

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cap-GNP_995827.2 YCG1 49..>526 CDD:227543 148/510 (29%)
HEAT repeat 95..124 CDD:293787 8/32 (25%)
HEAT repeat 134..163 CDD:293787 11/29 (38%)
HEAT repeat 176..203 CDD:293787 16/26 (62%)
HEAT repeat 214..240 CDD:293787 8/25 (32%)
HEAT repeat 243..270 CDD:293787 11/27 (41%)
Cnd3 603..898 CDD:463678 61/323 (19%)
PRK07003 <960..>1174 CDD:235906 22/115 (19%)
ncapgNP_001243134.2 None

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