DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13326 and VAC8

DIOPT Version :9

Sequence 1:NP_610838.1 Gene:CG13326 / 36439 FlyBaseID:FBgn0033794 Length:867 Species:Drosophila melanogaster
Sequence 2:NP_010903.3 Gene:VAC8 / 856702 SGDID:S000000739 Length:578 Species:Saccharomyces cerevisiae


Alignment Length:657 Identity:135/657 - (20%)
Similarity:235/657 - (35%) Gaps:201/657 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 CLKDPQ-------MAHGIVEATEFL-----EKFKLVFISSENPDTVFNSIEALHRMLLVQSADQM 202
            ||||..       :|....||...|     :|.:|.|.|.       ..::||  ..||.|.:..
Yeast     7 CLKDSSDEASVSPIADNEREAVTLLLGYLEDKDQLDFYSG-------GPLKAL--TTLVYSDNLN 62

  Fly   203 LDFTTQPDFPVDRIICEVTNEFQEIRKAALKTLKTLLADTGDDSVFEALHRCYFVLEQLVKVFCE 267
            |..:....|      .|:|.::  :|:.:.:.|:.:|                 :|.|     .:
Yeast    63 LQRSAALAF------AEITEKY--VRQVSREVLEPIL-----------------ILLQ-----SQ 97

  Fly   268 SPQGPEAADVIEVLATA----LRSEKMTKLFF-EQNLFDQVVEQVRNHMDLMPLEMRCTIISIFA 327
            .||       |:|.|.|    |......||.. |....:.::.|:...    .:|::|..:....
Yeast    98 DPQ-------IQVAACAALGNLAVNNENKLLIVEMGGLEPLINQMMGD----NVEVQCNAVGCIT 151

  Fly   328 ETAQYEQFLPRMHKAEIADMF--LTCLMQNKPAPAAYVIQG-LHRMSHHPEALRRIVAAYQEGAI 389
            ..|..:.   ..||...:...  ||.|.::|.........| |..|:|..|..:.:|.|   ||:
Yeast   152 NLATRDD---NKHKIATSGALIPLTKLAKSKHIRVQRNATGALLNMTHSEENRKELVNA---GAV 210

  Fly   390 RKLVAILMS--PDVAIKAREQAGEFLSRLLV-AAFRETAAQLQEQDIAVVLTAVIAQG-----QP 446
            ..||::|.|  |||    :......||.:.| .|.|:..||.:.:.::.:::.:.:..     |.
Yeast   211 PVLVSLLSSTDPDV----QYYCTTALSNIAVDEANRKKLAQTEPRLVSKLVSLMDSPSSRVKCQA 271

  Fly   447 TLSIDLILLLLTIIESLAQKEEYRTILGEYSSLTEQLAQLLMRSFAHSILVNNIFRCLCTLIDEA 511
            ||:          :.:||....|:..:.....| ..|.:|:.......:|.:  ..|:.. |...
Yeast   272 TLA----------LRNLASDTSYQLEIVRAGGL-PHLVKLIQSDSIPLVLAS--VACIRN-ISIH 322

  Fly   512 PVRETLL--ANYIVSSMK------------RALKSLSNLVKTSVTNFILQTTRFNEFIDAYIDRG 562
            |:.|.|:  |.::...::            .|:.:|.||..:|..|       ..||.::.....
Yeast   323 PLNEGLIVDAGFLKPLVRLLDYKDSEEIQCHAVSTLRNLAASSEKN-------RKEFFESGAVEK 380

  Fly   563 IMEVLLDFQKHAFCISTWGP-AIESILSKCPTMKFAIRNCLTFTDITAGKDFYVSRRKFEDFRKF 626
            ..|:.||           .| :::|.:|.|    |||   |...|::.                 
Yeast   381 CKELALD-----------SPVSVQSEISAC----FAI---LALADVSK----------------- 410

  Fly   627 QDILRNDCSPLDAVLVMNFDRPKPNQNDVIAVPLRCLSTITDLPGDQGWGYCKRPGDNNLPQYLE 691
            .|:|  :.:.|||::.|.|.:   ||.    |.....:.:.:|        |.|.  ||..:.:|
Yeast   411 LDLL--EANILDALIPMTFSQ---NQE----VSGNAAAALANL--------CSRV--NNYTKIIE 456

  Fly   692 ALNQTLAMHGLVENPERVRRTI---------DFENVAKRSKLIAQAVNAVMSENLKILDLNSTEE 747
            |.::.         .|.:|..:         .||::|     :...:..:.|.|.|:.||...::
Yeast   457 AWDRP---------NEGIRGFLIRFLKSDYATFEHIA-----LWTILQLLESHNDKVEDLVKNDD 507

  Fly   748 CCRNTVR 754
            ...|.||
Yeast   508 DIINGVR 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13326NP_610838.1 EDR1 <759..799 CDD:291079
VAC8NP_010903.3 SRP1 42..>358 CDD:227396 76/389 (20%)
armadillo repeat 119..155 CDD:293788 6/39 (15%)
armadillo repeat 160..194 CDD:293788 8/33 (24%)
armadillo repeat 204..235 CDD:293788 13/37 (35%)
armadillo repeat 242..280 CDD:293788 7/47 (15%)
armadillo repeat 286..319 CDD:293788 5/36 (14%)
armadillo repeat 326..361 CDD:293788 5/34 (15%)
armadillo repeat 369..402 CDD:293788 10/47 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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