DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13326 and PUB18

DIOPT Version :10

Sequence 1:NP_610838.1 Gene:CG13326 / 36439 FlyBaseID:FBgn0033794 Length:867 Species:Drosophila melanogaster
Sequence 2:NP_172526.1 Gene:PUB18 / 837597 AraportID:AT1G10560 Length:697 Species:Arabidopsis thaliana


Alignment Length:26 Identity:9/26 - (34%)
Similarity:11/26 - (42%) Gaps:0/26 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 IDLGARFIGGCCRTYARDIQRIKQTV 322
            ||..|.|.||.......|...|:.|:
plant    72 IDRPANFSGGNNNIEIMDESEIELTL 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13326NP_610838.1 EDR1 <758..799 CDD:433922
PUB18NP_172526.1 MLKL_NTD 26..165 CDD:455281 9/26 (35%)
RING-Ubox_PUB 290..341 CDD:438326
Arm 422..458 CDD:425727
armadillo repeat 425..457 CDD:293788
armadillo repeat 465..500 CDD:293788
PLN03200 502..>676 CDD:215629
Blue background indicates that the domain is not in the aligned region.

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