DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13326 and AT3G03440

DIOPT Version :10

Sequence 1:NP_610838.1 Gene:CG13326 / 36439 FlyBaseID:FBgn0033794 Length:867 Species:Drosophila melanogaster
Sequence 2:NP_186994.2 Gene:AT3G03440 / 821253 AraportID:AT3G03440 Length:408 Species:Arabidopsis thaliana


Alignment Length:386 Identity:71/386 - (18%)
Similarity:153/386 - (39%) Gaps:55/386 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 EALHRMLLVQSADQMLDFTTQPDFPVDRIICEVTNEFQEIRKAALKTLKTLLADTGDDSVFEALH 252
            |.||..:.|.|:   :..::.....:.|::..:.:|..:.|..|.|.::.|.         :..|
plant    44 ELLHTAVSVSSS---VSVSSSSSASIQRVLSLIRSEDCDSRLFAAKEIRRLT---------KTSH 96

  Fly   253 RC--YF--VLEQLVKVF-CESPQGPEAADVIEVLATALRSEKMTKLFFEQNLFDQVVEQVRNHMD 312
            ||  :|  .:|.||.:. .:||:....|.::.:|..|::.||......|....:.::..::::..
plant    97 RCRRHFSQAVEPLVSMLRFDSPESHHEAALLALLNLAVKDEKNKVSIIEAGALEPIINFLQSNSP 161

  Fly   313 LMPLEMRCTIISIFAETAQYEQFLPRMHKAEIADMFLTCLMQNKPAPAAYVIQGLHRMSHHPEAL 377
            .:......:::::.|....    .|.:....:..:.:..:....|...|..:..|..:|..|:.|
plant   162 TLQEYASASLLTLSASANN----KPIIGANGVVPLLVKVIKHGSPQAKADAVMALSNLSTLPDNL 222

  Fly   378 RRIVAAYQEGAIRKLVAILMSPDVAIKAREQAGEFLSRLLVAAFRETAAQLQEQDIAVVLTAVIA 442
            ..|:|.   ..:..::.:|.|...:.|..|:....:..|:|:........:.::...:.:..|:.
plant   223 SMILAT---KPLSPILNLLKSSKKSSKTSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLE 284

  Fly   443 QGQPTLSIDLILLLLTIIESLAQKEEYR---------------TILGEYSSLTEQLAQLLM---- 488
            .|........:.:|||:.:|  .:.:||               |:.|  :|.:...||.|:    
plant   285 NGSLQAREHAVGVLLTLCQS--DRSKYREPILREGVIPGLLELTVQG--TSKSRIKAQRLLCLLR 345

  Fly   489 -----RSFAHSILVNNIFRCLCTLI---DEAPVRETLLANYIVSSMKRALKSLSNLVKTSV 541
                 ||......:.||...|.:.|   |::...:.:||..:..||:::|:.|.....|.|
plant   346 NSESPRSEVQPDTIENIVSSLISHIDGDDQSGKAKKMLAEMVQVSMEKSLRHLQERASTLV 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13326NP_610838.1 EDR1 <758..799 CDD:433922
AT3G03440NP_186994.2 PLN03200 84..>401 CDD:215629 61/336 (18%)
SRP1 <143..>238 CDD:227396 11/101 (11%)
armadillo repeat 143..172 CDD:293788 1/28 (4%)
armadillo repeat 180..217 CDD:293788 4/40 (10%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.