DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13326 and armc3

DIOPT Version :9

Sequence 1:NP_610838.1 Gene:CG13326 / 36439 FlyBaseID:FBgn0033794 Length:867 Species:Drosophila melanogaster
Sequence 2:XP_688618.3 Gene:armc3 / 560136 ZFINID:ZDB-GENE-110614-1 Length:831 Species:Danio rerio


Alignment Length:940 Identity:212/940 - (22%)
Similarity:369/940 - (39%) Gaps:192/940 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ISKRVYEAKSTYPDRTKSEEKSFTEVSVPIKKLDTALLLLSSKEECVLLTIFSHITDFARRQDVN 68
            :.|:|.:...|.|      :..|..:|:..|...||:|:|||.||.||......|..||.:.|.|
Zfish     1 MGKKVKKEAETCP------KDVFDPLSIESKTATTAVLMLSSPEEEVLAKACEAIHKFAEKGDEN 59

  Fly    69 VLELKAHRLLELLLEKDLFIASENTMIRRFALYLLTALLDNTD--------------MSTYEPEQ 119
            ...|.....:|.|   .|.|:.|:.::||.|:..|..:..|.:              :|...||:
Zfish    60 KTCLMCLGAIEPL---SLLISHEDKIVRRNAVMALGVMASNNEVKKHLKCLDVIPAIISKLSPEE 121

  Fly   120 ADQILELACRFYMKEVDDFCIEYLTYILNVCLKDPQMAHGIVEATEFLEKFKLVFISSENPDTVF 184
            ...:.|.|         ..|:..|:...:..::       |.|:.......:|  :||.:||...
Zfish   122 NVMVHEFA---------TLCLASLSVDFSYKIQ-------IFESNGLEPLIQL--LSSPDPDVKK 168

  Fly   185 NSIEALHRMLLVQSADQMLDFTTQPDFPVDRIICEVTNEFQEIRKAALKTLKTLLADTGDDSVFE 249
            ||:|.:..  |||..............|  .::..:.:||..|::.||.|::.:..||.....|.
Zfish   169 NSVECIFN--LVQDVQNRAAVQRLNGLP--PLLDLLRSEFSVIQQLALHTIEKITTDTETCVAFR 229

  Fly   250 ALHRCYFVLEQL-VKVFCESPQGPEAADVIEVLATALRSEKMTKLFFEQNLFDQVVEQVRNHMDL 313
            .:.....:||.: :|.|.:..:|     .:.|:...|...:..:||......:|:::.|...   
Zfish   230 NVQGFERILEVVAMKEFSDLHEG-----ALRVILNCLEDTESMQLFQTMGGLEQLLQCVGTS--- 286

  Fly   314 MPLEMRCTIISIFAETAQYEQFLPRMHKAEIADMFLTCLMQNKPAPAAYVIQGLHRMSHH---PE 375
            ...|::...:...|:.||..:....:|:..|.......|.|...:....|.|.:..:|.:   .:
Zfish   287 TVAEVKANAVKAIAKMAQSSENRKILHERNIEKTLTDLLTQENESVRTAVCQAVATVSKNLSSRD 351

  Fly   376 ALRRIVAAYQEGAIRKLVAILMSPDVAIKAREQAGEFLS-------------------RLLVAAF 421
            ..|.:      ..||.:|.:|.|.  ..:.|..|.|.||                   ||||   
Zfish   352 TFRSL------DGIRPIVQLLNSE--GSELRMAAAEALSSLTNSNNLNAYAIYDAEGDRLLV--- 405

  Fly   422 RETAAQLQEQDIAVVLTAVIAQGQPTLSIDLILLLLTIIESLAQKEEYR-TILGEYS--SLTEQL 483
                .|||:......:.|.:|                 :.::|.:||.| :||...:  :|.|  
Zfish   406 ----RQLQDSCTGAAVYAAMA-----------------LTNMASQEELRKSILAHEAMPALVE-- 447

  Fly   484 AQLLMRSFAHSILVNNIFRCLCTLIDEAPVRETLLANYIVSSMKRALKSLSNLVKTSVTNFILQT 548
               |:.|..::||::.: :.:.:|..:|..|:.|.....:|::.:.|||::..::.:.:..|  :
Zfish   448 ---LLHSTDNNILISAV-QAVASLTCDAEARQELRNVGGLSALVQLLKSINAEIRRNASWAI--S 506

  Fly   549 TRFNEFIDA--YIDRGIMEVLLDFQKHAFCISTWGP-AIESILSKCPTMKFAIRNCLTFTDITAG 610
            ...|:.|.|  ..:.|.:|:|.:....:...:.:.. |::.:|....::|:::...|:.:|||. 
Zfish   507 VCANDEITASELCNVGALEILQEISLSSHRSNKFSQLALQKLLDSNLSLKYSLTGHLSSSDITT- 570

  Fly   611 KDFY--VSRRKFEDFRKFQDILRNDCSPLDAVLVMNFDRPKPNQNDVIAVPLRCLSTITDLPGD- 672
            ..||  ...|....|...:||.:...:...|.:.:|   .|| ||..|  |........|.|.| 
Zfish   571 DGFYDPGQIRVGHQFPVLEDISKQVVNQHRATIAVN---GKP-QNQFI--PKGPEEGKQDSPTDT 629

  Fly   673 ------------------QGWGY------------CKRPGDNNLPQYLEALNQTLAMHGLVENPE 707
                              :|.|:            || |....:.:...:|....|.|.||:  |
Zfish   630 TASSVLNGRRSSKTPSKTKGKGHKEEDEKKKEEDECK-PHQKIMVEETWSLPYDAAFHNLVK--E 691

  Fly   708 RVRRTIDFENVAKRSKLIAQAVNAVMS---ENLKILDLNSTEECCRNTVRCHLQELRHVLHTNFI 769
            .....:..::..|....:|..|...|.   |..|:.|.         ....|:.||:....:|.:
Zfish   692 AAESIMPLKDEVKMYTALAMLVCDAMGGQVEQQKLHDF---------LWELHISELKFEACSNIV 747

  Fly   770 PLGMVRSGCQFERAILFKGLADQIGLPCTLQRSVDGRMLYNELPLPLEPEKDVHCDKKTLKYMPW 834
            .:|.::.|..|.||:|||.|||:|||.|:|.|....| .:||: |.:.|       ||...|.  
Zfish   748 LIGKIKKGTYFHRALLFKVLADRIGLSCSLIRGEYNR-AWNEI-LIMGP-------KKAYGYS-- 801

  Fly   835 RMLRP-THVVDLLYNVGELYPMQSRQALQY 863
               :| ::::||::..|.|....|:.||.|
Zfish   802 ---QPESYIIDLMHQPGNLMKSNSQAALIY 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13326NP_610838.1 EDR1 <759..799 CDD:291079 18/39 (46%)
armc3XP_688618.3 ARM 31..179 CDD:237987 42/170 (25%)
armadillo repeat 60..96 CDD:293788 10/38 (26%)
ARM 108..220 CDD:237987 27/133 (20%)
armadillo repeat 110..136 CDD:293788 6/34 (18%)
armadillo repeat 144..179 CDD:293788 11/45 (24%)
armadillo repeat 184..218 CDD:293788 7/35 (20%)
ARM 268..385 CDD:237987 26/127 (20%)
HEAT_2 276..382 CDD:290374 22/116 (19%)
HEAT repeat 276..301 CDD:293787 3/27 (11%)
HEAT repeat 317..345 CDD:293787 5/27 (19%)
HEAT repeat 355..387 CDD:293787 10/39 (26%)
ARM 394..506 CDD:237987 30/143 (21%)
armadillo repeat 433..469 CDD:293788 10/41 (24%)
armadillo repeat 474..506 CDD:293788 7/33 (21%)
ARM 475..>554 CDD:237987 14/80 (18%)
EDR1 553..817 CDD:291079 73/296 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0167
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 92 1.000 Inparanoid score I5071
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113174at33208
OrthoFinder 1 1.000 - - FOG0009670
OrthoInspector 1 1.000 - - oto39908
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR46618
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 1 1.000 - - X7410
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.960

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